RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CACNA1HO95180 2353 aa7.94□□□□□ -1.14
LINC00346-201ENST00000538077 ADAMTSL4-AS1Q5T5F5 129 aa7.93□□□□□ -1.14
LINC00346-201ENST00000538077 Q6ZRU5 148 aa7.93□□□□□ -1.14
LINC00346-201ENST00000538077 COX7CP15954 63 aa7.92□□□□□ -1.14
LINC00346-201ENST00000538077 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
LINC00346-201ENST00000538077 PRRC2AP48634 2157 aaKnown RBP7.92□□□□□ -1.14
LINC00346-201ENST00000538077 C2orf48Q96LS8 159 aa7.92□□□□□ -1.14
LINC00346-201ENST00000538077 BPTFQ12830 3046 aa7.91□□□□□ -1.14
LINC00346-201ENST00000538077 NTM-AS1Q6ZSK4 140 aa7.91□□□□□ -1.14
LINC00346-201ENST00000538077 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
LINC00346-201ENST00000538077 Q6Q795 121 aa7.91□□□□□ -1.14
LINC00346-201ENST00000538077 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
LINC00346-201ENST00000538077 A0A087WVE0 104 aa7.89□□□□□ -1.15
LINC00346-201ENST00000538077 A0A087WSZ3 146 aa7.89□□□□□ -1.15
LINC00346-201ENST00000538077 PRYO14603 147 aa7.88□□□□□ -1.15
LINC00346-201ENST00000538077 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
LINC00346-201ENST00000538077 URB1-AS1Q96HZ7 61 aa7.88□□□□□ -1.15
LINC00346-201ENST00000538077 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
LINC00346-201ENST00000538077 NHLRC4P0CG21 123 aaPredicted RBP7.88□□□□□ -1.15
LINC00346-201ENST00000538077 TRBV7-6A0A0J9YX20 115 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 CREBBPQ92793 2442 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 PRR14LQ5THK1 2151 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
LINC00346-201ENST00000538077 SMIM26A0A096LP01 95 aa7.86□□□□□ -1.15
LINC00346-201ENST00000538077 C10orf142B7Z368 130 aa7.86□□□□□ -1.15
LINC00346-201ENST00000538077 PMAIP1Q13794 54 aa7.85□□□□□ -1.15
LINC00346-201ENST00000538077 C5orf42Q9H799 3197 aa7.85□□□□□ -1.15
LINC00346-201ENST00000538077 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
LINC00346-201ENST00000538077 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
LINC00346-201ENST00000538077 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
LINC00346-201ENST00000538077 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
LINC00346-201ENST00000538077 Q8N3U1 123 aa7.84□□□□□ -1.15
LINC00346-201ENST00000538077 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
LINC00346-201ENST00000538077 Q6JHZ5 121 aa7.84□□□□□ -1.15
LINC00346-201ENST00000538077 AMELXQ99217 191 aa7.84□□□□□ -1.15
LINC00346-201ENST00000538077 BEAN1Q3B7T3 259 aa7.83□□□□□ -1.16
LINC00346-201ENST00000538077 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
LINC00346-201ENST00000538077 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
LINC00346-201ENST00000538077 H0Y9P7 68 aa7.82□□□□□ -1.16
LINC00346-201ENST00000538077 Q9UF83 564 aa7.82□□□□□ -1.16
LINC00346-201ENST00000538077 MUC7Q8TAX7 377 aa7.82□□□□□ -1.16
LINC00346-201ENST00000538077 CUL9Q8IWT3 2517 aa7.82□□□□□ -1.16
LINC00346-201ENST00000538077 MOBPQ13875 183 aa7.81□□□□□ -1.16
LINC00346-201ENST00000538077 LINC00310P59036 64 aa7.81□□□□□ -1.16
LINC00346-201ENST00000538077 PLXNB1O43157 2135 aa7.81□□□□□ -1.16
LINC00346-201ENST00000538077 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
LINC00346-201ENST00000538077 LIMD2Q9BT23 127 aa7.81□□□□□ -1.16
LINC00346-201ENST00000538077 A0A1B0GUV1 79 aa7.8□□□□□ -1.16
LINC00346-201ENST00000538077 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
LINC00346-201ENST00000538077 TET2Q6N021 2002 aaPredicted RBP7.79□□□□□ -1.16
LINC00346-201ENST00000538077 RTL8CO15255 209 aa7.79□□□□□ -1.16
LINC00346-201ENST00000538077 KIAA0087Q14695 138 aa7.79□□□□□ -1.16
LINC00346-201ENST00000538077 CRYGAP11844 174 aa7.79□□□□□ -1.16
LINC00346-201ENST00000538077 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
LINC00346-201ENST00000538077 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
LINC00346-201ENST00000538077 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
LINC00346-201ENST00000538077 LINC00315P59091 139 aa7.78□□□□□ -1.16
LINC00346-201ENST00000538077 Q8N2B8 174 aa7.77□□□□□ -1.17
LINC00346-201ENST00000538077 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
LINC00346-201ENST00000538077 PSPHP1O15172 72 aa7.77□□□□□ -1.17
LINC00346-201ENST00000538077 COL27A1Q8IZC6 1860 aaPredicted RBP7.76□□□□□ -1.17
LINC00346-201ENST00000538077 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
LINC00346-201ENST00000538077 AGRNO00468 2067 aa7.76□□□□□ -1.17
LINC00346-201ENST00000538077 SPTBN5Q9NRC6 3674 aaKnown RBP7.76□□□□□ -1.17
LINC00346-201ENST00000538077 F8WDY8 70 aa7.75□□□□□ -1.17
LINC00346-201ENST00000538077 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
LINC00346-201ENST00000538077 MKI67P46013 3256 aaKnown RBP7.75□□□□□ -1.17
LINC00346-201ENST00000538077 HTTP42858 3142 aa7.75□□□□□ -1.17
LINC00346-201ENST00000538077 A0A096LNJ9 63 aa7.75□□□□□ -1.17
LINC00346-201ENST00000538077 PTPN13Q12923 2485 aa7.74□□□□□ -1.17
LINC00346-201ENST00000538077 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
LINC00346-201ENST00000538077 PCSK5Q92824 1860 aa7.74□□□□□ -1.17
LINC00346-201ENST00000538077 TRBV7-7A0A0K0K1E9 115 aa7.73□□□□□ -1.17
LINC00346-201ENST00000538077 HIVEP3Q5T1R4 2406 aa7.73□□□□□ -1.17
LINC00346-201ENST00000538077 PTPRBP23467 1997 aa7.73□□□□□ -1.17
LINC00346-201ENST00000538077 BDP1A6H8Y1 2624 aa7.73□□□□□ -1.17
LINC00346-201ENST00000538077 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
LINC00346-201ENST00000538077 SORL1Q92673 2214 aa7.72□□□□□ -1.17
LINC00346-201ENST00000538077 CDH23Q9H251 3354 aa7.72□□□□□ -1.17
LINC00346-201ENST00000538077 J3QL48 77 aa7.71□□□□□ -1.18
LINC00346-201ENST00000538077 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
LINC00346-201ENST00000538077 USP34Q70CQ2 3546 aa7.71□□□□□ -1.18
LINC00346-201ENST00000538077 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
LINC00346-201ENST00000538077 NBDYA0A0U1RRE5 68 aa7.7□□□□□ -1.18
LINC00346-201ENST00000538077 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
LINC00346-201ENST00000538077 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
LINC00346-201ENST00000538077 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
LINC00346-201ENST00000538077 CEP350Q5VT06 3117 aa7.69□□□□□ -1.18
LINC00346-201ENST00000538077 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
LINC00346-201ENST00000538077 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
LINC00346-201ENST00000538077 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
LINC00346-201ENST00000538077 ANKHD1Q8IWZ3 2542 aaKnown RBP7.68□□□□□ -1.18
LINC00346-201ENST00000538077 RPL37AP61513 92 aaKnown RBP7.68□□□□□ -1.18
LINC00346-201ENST00000538077 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
LINC00346-201ENST00000538077 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
LINC00346-201ENST00000538077 FAM168BA1KXE4 195 aa7.68□□□□□ -1.18
LINC00346-201ENST00000538077 EPM2AB3EWF7 344 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms