RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 C11orf68Q9H3H3 251 aaKnown RBP7.52□□□□□ -1.21
RTN3-208ENST00000537981 CENPEQ02224 2701 aa7.52□□□□□ -1.21
RTN3-208ENST00000537981 BLCAPP62952 87 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 KLK9Q2XQG4 91 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 NDUFA4O00483 81 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 SAA4P35542 130 aa7.51□□□□□ -1.21
RTN3-208ENST00000537981 PRR3P79522 188 aaKnown RBP7.51□□□□□ -1.21
RTN3-208ENST00000537981 GNLYP22749 145 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 CFHR3Q02985 330 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 MRPL55Q7Z7F7 128 aaKnown RBP7.5□□□□□ -1.21
RTN3-208ENST00000537981 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
RTN3-208ENST00000537981 BAHCC1Q9P281 2608 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 A0A096LNT2 108 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 LRCOL1A6NCL2 159 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 C5orf56Q8N8D9 126 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 LINC01560Q8TB33 94 aa7.5□□□□□ -1.21
RTN3-208ENST00000537981 LINC00158P58513 81 aa7.49□□□□□ -1.21
RTN3-208ENST00000537981 PLA2G2AP14555 144 aa7.49□□□□□ -1.21
RTN3-208ENST00000537981 LINC01547P58512 204 aaPredicted RBP7.49□□□□□ -1.21
RTN3-208ENST00000537981 HAMPP81172 84 aa7.49□□□□□ -1.21
RTN3-208ENST00000537981 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
RTN3-208ENST00000537981 K7EQG2 157 aa7.48□□□□□ -1.21
RTN3-208ENST00000537981 A8MU10 97 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 PAX4O43316 350 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 UBL5Q9BZL1 73 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 USP9YO00507 2555 aaPredicted RBP7.47□□□□□ -1.21
RTN3-208ENST00000537981 APCP25054 2843 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 H0YGX0 51 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 SPG11Q96JI7 2443 aa7.47□□□□□ -1.21
RTN3-208ENST00000537981 Q75L30 129 aa7.46□□□□□ -1.21
RTN3-208ENST00000537981 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.21
RTN3-208ENST00000537981 MOB4Q9Y3A3 225 aa7.46□□□□□ -1.21
RTN3-208ENST00000537981 CSPG4Q6UVK1 2322 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 ZANQ9Y493 2812 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 J3QKU1 62 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 Q8N3U1 123 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 CR1P17927 2039 aa7.46□□□□□ -1.22
RTN3-208ENST00000537981 JMJD1CQ15652 2540 aa7.45□□□□□ -1.22
RTN3-208ENST00000537981 PTPN13Q12923 2485 aa7.45□□□□□ -1.22
RTN3-208ENST00000537981 A8MTW9 85 aa7.45□□□□□ -1.22
RTN3-208ENST00000537981 MIFP14174 115 aa7.45□□□□□ -1.22
RTN3-208ENST00000537981 NANOS2P60321 138 aaKnown RBP7.45□□□□□ -1.22
RTN3-208ENST00000537981 SETXQ7Z333 2677 aaKnown RBP7.44□□□□□ -1.22
RTN3-208ENST00000537981 MINOS1-NBL1R4GNA1 71 aa7.44□□□□□ -1.22
RTN3-208ENST00000537981 FBN2P35556 2912 aa7.44□□□□□ -1.22
RTN3-208ENST00000537981 LY6EQ16553 131 aa7.44□□□□□ -1.22
RTN3-208ENST00000537981 Q6ZVQ6 151 aa7.44□□□□□ -1.22
RTN3-208ENST00000537981 Q8N814 137 aa7.44□□□□□ -1.22
RTN3-208ENST00000537981 TRBV10-3A0A0K0K1G6 114 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 C10orf99Q6UWK7 81 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 COX7B2Q8TF08 81 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 DOPEY1Q5JWR5 2465 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 Q8N9L7 120 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 NOTCH2Q04721 2471 aa7.43□□□□□ -1.22
RTN3-208ENST00000537981 BRD3OSQ6XYD6 125 aa7.42□□□□□ -1.22
RTN3-208ENST00000537981 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
RTN3-208ENST00000537981 Q6ZQT0 140 aa7.42□□□□□ -1.22
RTN3-208ENST00000537981 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
RTN3-208ENST00000537981 WNK1Q9H4A3 2382 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 TRBV6-4A0A1B0GX49 114 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 JMJD7-PLA2G4BH0Y9G9 81 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 APOC4P55056 127 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
RTN3-208ENST00000537981 NBEAL2Q6ZNJ1 2754 aa7.4□□□□□ -1.22
RTN3-208ENST00000537981 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.23
RTN3-208ENST00000537981 NREPQ16612 68 aa7.4□□□□□ -1.23
RTN3-208ENST00000537981 Q6ZRU5 148 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 LY6G6DO95868 133 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 DAD1P61803 113 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 ESRGQ1W209 222 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 Q6ZTC4 211 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 Q8NDZ9 215 aa7.39□□□□□ -1.23
RTN3-208ENST00000537981 NF1P21359 2839 aa7.38□□□□□ -1.23
RTN3-208ENST00000537981 PSPHP1O15172 72 aa7.38□□□□□ -1.23
RTN3-208ENST00000537981 ABCA12Q86UK0 2595 aa7.38□□□□□ -1.23
RTN3-208ENST00000537981 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
RTN3-208ENST00000537981 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
RTN3-208ENST00000537981 Q6ZRP5 223 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 TLN2Q9Y4G6 2542 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 HIGD2AQ9BW72 106 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 TEX15Q9BXT5 2789 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 POLQO75417 2590 aa7.37□□□□□ -1.23
RTN3-208ENST00000537981 PLAC8L1A1L4L8 177 aa7.36□□□□□ -1.23
RTN3-208ENST00000537981 K7EQD1 137 aa7.36□□□□□ -1.23
RTN3-208ENST00000537981 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
RTN3-208ENST00000537981 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms