RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM19A4Q96LR4 140 aa4.15□□□□□ -1.74
CSMD1-215ENST00000537824 CNFNQ9BYD5 112 aa4.15□□□□□ -1.74
CSMD1-215ENST00000537824 RNASE3P12724 160 aaKnown RBP4.15□□□□□ -1.74
CSMD1-215ENST00000537824 EDN2P20800 178 aa4.15□□□□□ -1.75
CSMD1-215ENST00000537824 LINC00574Q9H8X3 128 aa4.15□□□□□ -1.75
CSMD1-215ENST00000537824 IGLV1-47P01700 117 aa4.15□□□□□ -1.75
CSMD1-215ENST00000537824 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.75
CSMD1-215ENST00000537824 SMCPP49901 116 aaPredicted RBP4.15□□□□□ -1.75
CSMD1-215ENST00000537824 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.75
CSMD1-215ENST00000537824 M0R378 163 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 A0A096LNJ9 63 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 PRM2P04554 102 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 C9orf116Q5BN46 136 aaPredicted RBP4.14□□□□□ -1.75
CSMD1-215ENST00000537824 K7EQG2 157 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 CXCL6P80162 114 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 Q6ZVQ6 151 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 TRANK1O15050 2925 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 TRBV6-8A0A0A6YYG3 113 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 MAP6D1Q9H9H5 199 aa4.14□□□□□ -1.75
CSMD1-215ENST00000537824 Q96MF0 132 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 MSMPQ1L6U9 139 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 PRO0255Q9UI72 69 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 ZNF580Q9UK33 172 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 C1orf137Q5JT78 98 aa4.13□□□□□ -1.75
CSMD1-215ENST00000537824 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 CD164L2Q6UWJ8 174 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 COX6A2Q02221 97 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 UBE2D4Q9Y2X8 147 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 TRBV10-3A0A0K0K1G6 114 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 COX17Q14061 63 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 TNFRSF13BO14836 293 aaPredicted RBP4.12□□□□□ -1.75
CSMD1-215ENST00000537824 C4orf3Q8WVX3 66 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 IGSF10Q6WRI0 2623 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
CSMD1-215ENST00000537824 IGFL3Q6UXB1 125 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 RETNLBQ9BQ08 111 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 F8WDY8 70 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 LINC00337Q8N6G1 96 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 MDFIQ99750 246 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 C9orf66Q5T8R8 295 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 ODF3BA8MYP8 253 aa4.11□□□□□ -1.75
CSMD1-215ENST00000537824 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 Q8IZM0 81 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 TMEM89A2RUT3 159 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 NBEAL2Q6ZNJ1 2754 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 KLLNB2CW77 178 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 A6NDX4 124 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 IGLV9-49A0A0B4J1Y8 123 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 SMIM1B2RUZ4 78 aa4.1□□□□□ -1.75
CSMD1-215ENST00000537824 A8MTW9 85 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 TRAV10A0A0B4J240 114 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 CD164Q04900 197 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 IGLV2-18A0A075B6J9 118 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 UNQ6190/PRO20217Q6UXQ8 127 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
CSMD1-215ENST00000537824 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.76
CSMD1-215ENST00000537824 LINC00336Q6ZUF6 198 aa4.09□□□□□ -1.76
CSMD1-215ENST00000537824 AMELXQ99217 191 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 LY6LH3BQJ8 138 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
CSMD1-215ENST00000537824 LRBAP50851 2863 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 DEFB114Q30KQ6 69 aa4.08□□□□□ -1.76
CSMD1-215ENST00000537824 PLA2G2AP14555 144 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 SPINK1P00995 79 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 FHL2Q14192 279 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 FHL3Q13643 280 aa4.07□□□□□ -1.76
CSMD1-215ENST00000537824 BBC3Q96PG8 261 aaPredicted RBP4.06□□□□□ -1.76
CSMD1-215ENST00000537824 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 LINC01546A6NGU7 62 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 NHLRC4P0CG21 123 aaPredicted RBP4.06□□□□□ -1.76
CSMD1-215ENST00000537824 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 BCE1O60756 84 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 DAZAP2Q15038 168 aaPredicted RBP4.06□□□□□ -1.76
CSMD1-215ENST00000537824 SMIM29Q86T20 159 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 CHCHD7Q9BUK0 85 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
CSMD1-215ENST00000537824 KPRPQ5T749 579 aaPredicted RBP4.05□□□□□ -1.76
CSMD1-215ENST00000537824 X6R8D5 127 aa4.05□□□□□ -1.76
CSMD1-215ENST00000537824 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.05□□□□□ -1.76
CSMD1-215ENST00000537824 LELP1Q5T871 98 aa4.05□□□□□ -1.76
CSMD1-215ENST00000537824 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms