RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TOMM7Q9P0U1 55 aa10.33□□□□□ -0.76
SFSWAP-206ENST00000537582 IGHV1-58A0A0C4DH39 117 aa10.32□□□□□ -0.76
SFSWAP-206ENST00000537582 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
SFSWAP-206ENST00000537582 PTTG1IPP53801 180 aa10.32□□□□□ -0.76
SFSWAP-206ENST00000537582 TAL2Q16559 108 aa10.32□□□□□ -0.76
SFSWAP-206ENST00000537582 C1orf134Q5TEV5 83 aa10.32□□□□□ -0.76
SFSWAP-206ENST00000537582 HERVK_113P61574 105 aa10.31□□□□□ -0.76
SFSWAP-206ENST00000537582 RYR2Q92736 4967 aa10.31□□□□□ -0.76
SFSWAP-206ENST00000537582 VAMP3Q15836 100 aa10.31□□□□□ -0.76
SFSWAP-206ENST00000537582 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
SFSWAP-206ENST00000537582 LEPROTO15243 131 aa10.3□□□□□ -0.76
SFSWAP-206ENST00000537582 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
SFSWAP-206ENST00000537582 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
SFSWAP-206ENST00000537582 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
SFSWAP-206ENST00000537582 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
SFSWAP-206ENST00000537582 C9orf118A6NHY6 69 aa10.29□□□□□ -0.76
SFSWAP-206ENST00000537582 RTL8CO15255 209 aa10.29□□□□□ -0.76
SFSWAP-206ENST00000537582 J3QQQ9 107 aa10.28□□□□□ -0.76
SFSWAP-206ENST00000537582 APOMO95445 188 aa10.28□□□□□ -0.76
SFSWAP-206ENST00000537582 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
SFSWAP-206ENST00000537582 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 MYMXA0A1B0GTQ4 84 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 CEND1Q8N111 149 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 DNAH17Q9UFH2 4485 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 LGALS3P17931 250 aaKnown RBP10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 Q8IZM0 81 aa10.26□□□□□ -0.77
SFSWAP-206ENST00000537582 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 SLPIP03973 132 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 PRSS2P07478 247 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 GCSHP23434 173 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 FXYD2P54710 66 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 TNP2Q05952 138 aa10.25□□□□□ -0.77
SFSWAP-206ENST00000537582 A0A087WTM6 91 aa10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 CFAP161Q6P656 301 aa10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 UNQ6190/PRO20217Q6UXQ8 127 aa10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 ZNF625Q96I27 306 aaPredicted RBP10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
SFSWAP-206ENST00000537582 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
SFSWAP-206ENST00000537582 ZNF561-AS1K7EIQ3 104 aa10.23□□□□□ -0.77
SFSWAP-206ENST00000537582 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
SFSWAP-206ENST00000537582 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
SFSWAP-206ENST00000537582 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
SFSWAP-206ENST00000537582 NDUFA1O15239 70 aa10.22□□□□□ -0.77
SFSWAP-206ENST00000537582 CKS1BP61024 79 aa10.22□□□□□ -0.77
SFSWAP-206ENST00000537582 Q6ZRU5 148 aa10.21□□□□□ -0.78
SFSWAP-206ENST00000537582 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.78
SFSWAP-206ENST00000537582 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.78
SFSWAP-206ENST00000537582 H3BUT2 72 aa10.2□□□□□ -0.78
SFSWAP-206ENST00000537582 K7EP34 96 aa10.2□□□□□ -0.78
SFSWAP-206ENST00000537582 C9orf116Q5BN46 136 aaPredicted RBP10.2□□□□□ -0.78
SFSWAP-206ENST00000537582 Q8N814 137 aa10.2□□□□□ -0.78
SFSWAP-206ENST00000537582 FAT2Q9NYQ8 4349 aa10.2□□□□□ -0.78
SFSWAP-206ENST00000537582 A0A1B0GWB2 263 aa10.19□□□□□ -0.78
SFSWAP-206ENST00000537582 A0A1W2PPM0 123 aa10.19□□□□□ -0.78
SFSWAP-206ENST00000537582 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
SFSWAP-206ENST00000537582 C6orf48Q9UBA6 75 aa10.19□□□□□ -0.78
SFSWAP-206ENST00000537582 A0A0J9YXY3 114 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 GAGE10A6NGK3 116 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 RYR3Q15413 4870 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 SYCNQ0VAF6 134 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 RAB37Q96AX2 223 aa10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
SFSWAP-206ENST00000537582 CXCL5P42830 114 aa10.17□□□□□ -0.78
SFSWAP-206ENST00000537582 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
SFSWAP-206ENST00000537582 FABP2P12104 132 aa10.16□□□□□ -0.78
SFSWAP-206ENST00000537582 C14orf177Q52M58 125 aa10.16□□□□□ -0.78
SFSWAP-206ENST00000537582 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
SFSWAP-206ENST00000537582 LINC01620Q4KN68 170 aa10.15□□□□□ -0.78
SFSWAP-206ENST00000537582 K7ERJ3 54 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 PFN2P35080 140 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 SCGB1D4Q6XE38 83 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 DAND5Q8N907 189 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 A6NJY4 79 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 HERV-K104P63124 156 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 MEIG1Q5JSS6 88 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 LITAFQ99732 161 aa10.14□□□□□ -0.79
SFSWAP-206ENST00000537582 KRTAP10-2P60368 255 aa10.13□□□□□ -0.79
SFSWAP-206ENST00000537582 NAA38Q9BRA0 125 aaKnown RBP10.13□□□□□ -0.79
SFSWAP-206ENST00000537582 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
SFSWAP-206ENST00000537582 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
SFSWAP-206ENST00000537582 F8WDY8 70 aa10.1□□□□□ -0.79
SFSWAP-206ENST00000537582 LINC00158P58513 81 aa10.1□□□□□ -0.79
SFSWAP-206ENST00000537582 PKD1P98161 4303 aa10.1□□□□□ -0.79
SFSWAP-206ENST00000537582 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
SFSWAP-206ENST00000537582 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
SFSWAP-206ENST00000537582 NPC2P61916 151 aa10.09□□□□□ -0.79
SFSWAP-206ENST00000537582 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
SFSWAP-206ENST00000537582 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms