RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
MKS1-204ENST00000537529 CLEC2BQ92478 149 aa10.75□□□□□ -0.69
MKS1-204ENST00000537529 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
MKS1-204ENST00000537529 C11orf68Q9H3H3 251 aaKnown RBP10.75□□□□□ -0.69
MKS1-204ENST00000537529 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
MKS1-204ENST00000537529 SND1-IT1Q9HBX3 110 aa10.75□□□□□ -0.69
MKS1-204ENST00000537529 CRPP02741 224 aa10.74□□□□□ -0.69
MKS1-204ENST00000537529 Q8N3U1 123 aa10.74□□□□□ -0.69
MKS1-204ENST00000537529 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
MKS1-204ENST00000537529 RETNQ9HD89 108 aa10.74□□□□□ -0.69
MKS1-204ENST00000537529 PFN2P35080 140 aa10.73□□□□□ -0.69
MKS1-204ENST00000537529 F8P00451 2351 aa10.73□□□□□ -0.69
MKS1-204ENST00000537529 GAGE12HA6NDE8 117 aa10.73□□□□□ -0.69
MKS1-204ENST00000537529 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
MKS1-204ENST00000537529 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 H3BT86 120 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 MALP21145 153 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 CXCL5P42830 114 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 CCL18P55774 89 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 CKS1BP61024 79 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
MKS1-204ENST00000537529 NBEAL2Q6ZNJ1 2754 aa10.71□□□□□ -0.69
MKS1-204ENST00000537529 C2orf82Q6UX34 121 aa10.71□□□□□ -0.69
MKS1-204ENST00000537529 H3BNG1 76 aa10.7□□□□□ -0.7
MKS1-204ENST00000537529 IGKV2-28A0A075B6P5 120 aa10.69□□□□□ -0.7
MKS1-204ENST00000537529 IGKV2D-28P01615 120 aa10.69□□□□□ -0.7
MKS1-204ENST00000537529 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
MKS1-204ENST00000537529 NTN5Q8WTR8 489 aaPredicted RBP10.69□□□□□ -0.7
MKS1-204ENST00000537529 KIAA0087Q14695 138 aa10.69□□□□□ -0.7
MKS1-204ENST00000537529 LINC00337Q8N6G1 96 aa10.69□□□□□ -0.7
MKS1-204ENST00000537529 SIGMAR1Q99720 223 aa10.68□□□□□ -0.7
MKS1-204ENST00000537529 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
MKS1-204ENST00000537529 PRR34Q9NV39 138 aa10.67□□□□□ -0.7
MKS1-204ENST00000537529 C21orf62-AS1Q17RA5 79 aa10.67□□□□□ -0.7
MKS1-204ENST00000537529 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
MKS1-204ENST00000537529 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
MKS1-204ENST00000537529 KLK12Q9UKR0 248 aa10.67□□□□□ -0.7
MKS1-204ENST00000537529 COX17Q14061 63 aa10.66□□□□□ -0.7
MKS1-204ENST00000537529 Q6ZTC4 211 aa10.65□□□□□ -0.7
MKS1-204ENST00000537529 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
MKS1-204ENST00000537529 TRACP01848 142 aa10.65□□□□□ -0.7
MKS1-204ENST00000537529 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
MKS1-204ENST00000537529 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
MKS1-204ENST00000537529 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
MKS1-204ENST00000537529 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
MKS1-204ENST00000537529 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
MKS1-204ENST00000537529 SMIM11BQ8TCY0 68 aa10.62□□□□□ -0.71
MKS1-204ENST00000537529 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
MKS1-204ENST00000537529 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
MKS1-204ENST00000537529 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
MKS1-204ENST00000537529 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
MKS1-204ENST00000537529 C11orf45Q8TAV5 145 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 MUC7Q8TAX7 377 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 H0YGX0 51 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 NDUFC2O95298 119 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 NANOS2P60321 138 aaKnown RBP10.59□□□□□ -0.71
MKS1-204ENST00000537529 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
MKS1-204ENST00000537529 DEFB131BA0A096LNP1 70 aa10.58□□□□□ -0.72
MKS1-204ENST00000537529 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
MKS1-204ENST00000537529 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
MKS1-204ENST00000537529 UNQ6190/PRO20217Q6UXQ8 127 aa10.56□□□□□ -0.72
MKS1-204ENST00000537529 C6orf223Q8N319 242 aa10.56□□□□□ -0.72
MKS1-204ENST00000537529 CYSRT1A8MQ03 144 aa10.56□□□□□ -0.72
MKS1-204ENST00000537529 BAALC-AS2P0C853 105 aa10.56□□□□□ -0.72
MKS1-204ENST00000537529 FLNBO75369 2602 aaKnown RBP10.56□□□□□ -0.72
MKS1-204ENST00000537529 ESRGQ1W209 222 aa10.55□□□□□ -0.72
MKS1-204ENST00000537529 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
MKS1-204ENST00000537529 DNAL4O96015 105 aa10.54□□□□□ -0.72
MKS1-204ENST00000537529 XGP55808 180 aa10.54□□□□□ -0.72
MKS1-204ENST00000537529 GVQW2A0A096LPI5 108 aaPredicted RBP10.53□□□□□ -0.72
MKS1-204ENST00000537529 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
MKS1-204ENST00000537529 A0A087WYN8 130 aa10.53□□□□□ -0.72
MKS1-204ENST00000537529 FBN1P35555 2871 aaKnown RBP10.52□□□□□ -0.72
MKS1-204ENST00000537529 MT-ATP8P03928 68 aa10.52□□□□□ -0.73
MKS1-204ENST00000537529 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
MKS1-204ENST00000537529 Q9HAA7 133 aa10.52□□□□□ -0.73
MKS1-204ENST00000537529 PRR3P79522 188 aaKnown RBP10.51□□□□□ -0.73
MKS1-204ENST00000537529 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
MKS1-204ENST00000537529 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
MKS1-204ENST00000537529 TRAV10A0A0B4J240 114 aa10.5□□□□□ -0.73
MKS1-204ENST00000537529 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
MKS1-204ENST00000537529 NCR3O14931 201 aa10.49□□□□□ -0.73
MKS1-204ENST00000537529 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
MKS1-204ENST00000537529 LECT2O14960 151 aa10.49□□□□□ -0.73
MKS1-204ENST00000537529 TM2D3Q9BRN9 247 aa10.49□□□□□ -0.73
MKS1-204ENST00000537529 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
MKS1-204ENST00000537529 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
MKS1-204ENST00000537529 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
MKS1-204ENST00000537529 S100A7L2Q5SY68 101 aa10.48□□□□□ -0.73
MKS1-204ENST00000537529 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
MKS1-204ENST00000537529 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
MKS1-204ENST00000537529 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
MKS1-204ENST00000537529 K7EIL1 84 aa10.47□□□□□ -0.73
MKS1-204ENST00000537529 Q8NDZ9 215 aa10.47□□□□□ -0.73
MKS1-204ENST00000537529 A0A1B0GX51 115 aa10.46□□□□□ -0.73
MKS1-204ENST00000537529 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
MKS1-204ENST00000537529 HIGD2BQ4VC39 106 aa10.46□□□□□ -0.73
MKS1-204ENST00000537529 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.73
MKS1-204ENST00000537529 SNCGO76070 127 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms