RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 DEFB1P60022 68 aa7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 HAMPP81172 84 aa7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 TOMM7Q9P0U1 55 aa7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 KLLNB2CW77 178 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 ESRGQ1W209 222 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 IGLV5-45A0A087WSX0 123 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 IGLV5-39A0A0G2JS06 123 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 KLK9Q9UKQ9 250 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 FLNCQ14315 2725 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 TMEM89A2RUT3 159 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 SLPIP03973 132 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
CLSTN3-207ENST00000537408 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
CLSTN3-207ENST00000537408 LINC00158P58513 81 aa7.79□□□□□ -1.16
CLSTN3-207ENST00000537408 DEFB136Q30KP8 78 aa7.79□□□□□ -1.16
CLSTN3-207ENST00000537408 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
CLSTN3-207ENST00000537408 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
CLSTN3-207ENST00000537408 FUSP35637 526 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLSTN3-207ENST00000537408 UBE2E2Q96LR5 201 aa7.78□□□□□ -1.16
CLSTN3-207ENST00000537408 PAX4O43316 350 aa7.78□□□□□ -1.16
CLSTN3-207ENST00000537408 TRGV4A0A0C4DH28 118 aa7.77□□□□□ -1.17
CLSTN3-207ENST00000537408 LINC00337Q8N6G1 96 aa7.77□□□□□ -1.17
CLSTN3-207ENST00000537408 INSP01308 110 aa7.77□□□□□ -1.17
CLSTN3-207ENST00000537408 IGHV3-53P01767 116 aa7.76□□□□□ -1.17
CLSTN3-207ENST00000537408 LINC00467Q9BRT7 94 aa7.76□□□□□ -1.17
CLSTN3-207ENST00000537408 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
CLSTN3-207ENST00000537408 CYSRT1A8MQ03 144 aa7.76□□□□□ -1.17
CLSTN3-207ENST00000537408 Q6ZRU5 148 aa7.76□□□□□ -1.17
CLSTN3-207ENST00000537408 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
CLSTN3-207ENST00000537408 IBA57-AS1B1ANH7 110 aa7.75□□□□□ -1.17
CLSTN3-207ENST00000537408 TRAV10A0A0B4J240 114 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 Q8N6K4 173 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 FAM104AQ969W3 186 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 SLURP1P55000 103 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 MUC3AQ02505 3323 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 COX6A2Q02221 97 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 UNQ9165/PRO28630Q6UXU0 137 aa7.74□□□□□ -1.17
CLSTN3-207ENST00000537408 A0A096LNT2 108 aa7.73□□□□□ -1.17
CLSTN3-207ENST00000537408 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-207ENST00000537408 NREPQ16612 68 aa7.73□□□□□ -1.17
CLSTN3-207ENST00000537408 UBE2DNLQ8IWF7 75 aa7.73□□□□□ -1.17
CLSTN3-207ENST00000537408 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
CLSTN3-207ENST00000537408 C4orf3Q8WVX3 66 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 MUC4Q99102 2169 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 ZNF702PQ9H963 129 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 IGHV3-38A0A0C4DH36 116 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 ESM1Q9NQ30 184 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 CELSR3Q9NYQ7 3312 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 PRYO14603 147 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 CXCL6P80162 114 aa7.72□□□□□ -1.17
CLSTN3-207ENST00000537408 ERC2-IT1O76042 136 aa7.71□□□□□ -1.17
CLSTN3-207ENST00000537408 KLK9Q2XQG4 91 aa7.71□□□□□ -1.17
CLSTN3-207ENST00000537408 Q8N3U1 123 aa7.71□□□□□ -1.17
CLSTN3-207ENST00000537408 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
CLSTN3-207ENST00000537408 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
CLSTN3-207ENST00000537408 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
CLSTN3-207ENST00000537408 COX7B2Q8TF08 81 aa7.71□□□□□ -1.18
CLSTN3-207ENST00000537408 PDE6GP18545 87 aa7.7□□□□□ -1.18
CLSTN3-207ENST00000537408 APOC4P55056 127 aa7.7□□□□□ -1.18
CLSTN3-207ENST00000537408 ZNF561-AS1K7EIQ3 104 aa7.7□□□□□ -1.18
CLSTN3-207ENST00000537408 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
CLSTN3-207ENST00000537408 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 PROK1P58294 105 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 CCL18P55774 89 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 FSHBP01225 129 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 Q6ZVQ6 151 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 Q8N814 137 aa7.69□□□□□ -1.18
CLSTN3-207ENST00000537408 A0A087WZ39 114 aa7.68□□□□□ -1.18
CLSTN3-207ENST00000537408 LYRM9A8MSI8 78 aa7.68□□□□□ -1.18
CLSTN3-207ENST00000537408 C10orf99Q6UWK7 81 aa7.68□□□□□ -1.18
CLSTN3-207ENST00000537408 MDFIQ99750 246 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 BPY2O14599 106 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 KRTAP21-3Q3LHN1 58 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 K7EMT4 169 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 DEFB130BP0DP73 79 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 DEFB130AP0DP74 79 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 ITPR1Q14643 2758 aa7.67□□□□□ -1.18
CLSTN3-207ENST00000537408 Q6ZTI0 123 aa7.66□□□□□ -1.18
CLSTN3-207ENST00000537408 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
CLSTN3-207ENST00000537408 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
CLSTN3-207ENST00000537408 ITPR2Q14571 2701 aa7.66□□□□□ -1.18
CLSTN3-207ENST00000537408 KALRNO60229 2985 aa7.65□□□□□ -1.18
CLSTN3-207ENST00000537408 Q6ZQT0 140 aa7.65□□□□□ -1.18
CLSTN3-207ENST00000537408 STAB1Q9NY15 2570 aa7.65□□□□□ -1.18
CLSTN3-207ENST00000537408 LOC110117498A0A087WWA1 95 aa7.65□□□□□ -1.19
CLSTN3-207ENST00000537408 OXLD1Q5BKU9 147 aa7.64□□□□□ -1.19
CLSTN3-207ENST00000537408 H3BQ85 93 aa7.64□□□□□ -1.19
CLSTN3-207ENST00000537408 UBE2BP63146 152 aa7.64□□□□□ -1.19
CLSTN3-207ENST00000537408 NBEAQ8NFP9 2946 aa7.64□□□□□ -1.19
CLSTN3-207ENST00000537408 NTM-AS1Q6ZSK4 140 aa7.64□□□□□ -1.19
CLSTN3-207ENST00000537408 Q1T7F1 81 aa7.63□□□□□ -1.19
CLSTN3-207ENST00000537408 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms