RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 NBEAL2Q6ZNJ1 2754 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 XCL1P47992 114 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 SMR3AQ99954 134 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 Q8IZM0 81 aa11.11□□□□□ -0.63
CHMP1A-202ENST00000535997 PAX4O43316 350 aa11.1□□□□□ -0.63
CHMP1A-202ENST00000535997 MALP21145 153 aa11.1□□□□□ -0.63
CHMP1A-202ENST00000535997 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
CHMP1A-202ENST00000535997 C9orf66Q5T8R8 295 aa11.09□□□□□ -0.63
CHMP1A-202ENST00000535997 Q9HAA7 133 aa11.09□□□□□ -0.63
CHMP1A-202ENST00000535997 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
CHMP1A-202ENST00000535997 DNAL4O96015 105 aa11.08□□□□□ -0.64
CHMP1A-202ENST00000535997 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
CHMP1A-202ENST00000535997 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
CHMP1A-202ENST00000535997 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
CHMP1A-202ENST00000535997 FASNP49327 2511 aaKnown RBP11.06□□□□□ -0.64
CHMP1A-202ENST00000535997 A0A096LPF7 62 aa11.06□□□□□ -0.64
CHMP1A-202ENST00000535997 A0A087WYN8 130 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 CD164L2Q6UWJ8 174 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 VWFP04275 2813 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 LY6G6DO95868 133 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 LINC00643Q86TS7 51 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
CHMP1A-202ENST00000535997 CLPSL2Q6UWE3 100 aa11.04□□□□□ -0.64
CHMP1A-202ENST00000535997 LINC00269Q8N2A0 174 aa11.04□□□□□ -0.64
CHMP1A-202ENST00000535997 APOC4P55056 127 aa11.04□□□□□ -0.64
CHMP1A-202ENST00000535997 COX17Q14061 63 aa11.04□□□□□ -0.64
CHMP1A-202ENST00000535997 DEFB135Q30KP9 77 aa11.03□□□□□ -0.64
CHMP1A-202ENST00000535997 CXCL5P42830 114 aa11.02□□□□□ -0.65
CHMP1A-202ENST00000535997 KIAA0087Q14695 138 aa11.02□□□□□ -0.65
CHMP1A-202ENST00000535997 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
CHMP1A-202ENST00000535997 ATP5G1P05496 136 aa11.01□□□□□ -0.65
CHMP1A-202ENST00000535997 SMCR5Q8TEV8 140 aa11.01□□□□□ -0.65
CHMP1A-202ENST00000535997 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
CHMP1A-202ENST00000535997 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
CHMP1A-202ENST00000535997 LECT2O14960 151 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 DEFB4AO15263 64 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 DAD1P61803 113 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 REG3AQ06141 175 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 NDUFC2O95298 119 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 ANGP03950 147 aaKnown RBP11□□□□□ -0.65
CHMP1A-202ENST00000535997 CFAP161Q6P656 301 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
CHMP1A-202ENST00000535997 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
CHMP1A-202ENST00000535997 MIFP14174 115 aa10.98□□□□□ -0.65
CHMP1A-202ENST00000535997 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
CHMP1A-202ENST00000535997 B5MCH6 92 aa10.97□□□□□ -0.65
CHMP1A-202ENST00000535997 IGLV10-54A0A075B6I4 117 aa10.96□□□□□ -0.65
CHMP1A-202ENST00000535997 A0A1B0GX51 115 aa10.96□□□□□ -0.65
CHMP1A-202ENST00000535997 Q8NAQ8 132 aa10.96□□□□□ -0.65
CHMP1A-202ENST00000535997 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
CHMP1A-202ENST00000535997 NOTCH2Q04721 2471 aa10.96□□□□□ -0.66
CHMP1A-202ENST00000535997 CCDC179H3BU77 68 aa10.96□□□□□ -0.66
CHMP1A-202ENST00000535997 NANOS2P60321 138 aaKnown RBP10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 ORMDL1Q9P0S3 153 aa10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 INAFM1C9JVW0 142 aa10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 SPART-AS1P0CW21 52 aa10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 Q8N3U1 123 aa10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 KLK5Q9Y337 293 aaPredicted RBP10.95□□□□□ -0.66
CHMP1A-202ENST00000535997 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
CHMP1A-202ENST00000535997 C14orf132Q9NPU4 83 aa10.94□□□□□ -0.66
CHMP1A-202ENST00000535997 CELA1Q9UNI1 258 aa10.94□□□□□ -0.66
CHMP1A-202ENST00000535997 LELP1Q5T871 98 aa10.93□□□□□ -0.66
CHMP1A-202ENST00000535997 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
CHMP1A-202ENST00000535997 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
CHMP1A-202ENST00000535997 SLPIP03973 132 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 MUC7Q8TAX7 377 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 FAM236AA0A1B0GUQ0 79 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 FAM236BA0A1B0GV22 79 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 Q8N814 137 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
CHMP1A-202ENST00000535997 OTOGQ6ZRI0 2925 aa10.91□□□□□ -0.66
CHMP1A-202ENST00000535997 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
CHMP1A-202ENST00000535997 WFDC9Q8NEX5 89 aa10.91□□□□□ -0.66
CHMP1A-202ENST00000535997 HECTD1Q9ULT8 2610 aa10.9□□□□□ -0.66
CHMP1A-202ENST00000535997 NCR3O14931 201 aa10.9□□□□□ -0.66
CHMP1A-202ENST00000535997 PRR34Q9NV39 138 aa10.89□□□□□ -0.67
CHMP1A-202ENST00000535997 A0A0J9YWU9 116 aa10.88□□□□□ -0.67
CHMP1A-202ENST00000535997 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
CHMP1A-202ENST00000535997 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
CHMP1A-202ENST00000535997 JMJD7-PLA2G4BH0Y9G9 81 aa10.88□□□□□ -0.67
CHMP1A-202ENST00000535997 HTN3P15516 51 aa10.88□□□□□ -0.67
CHMP1A-202ENST00000535997 WIPF1O43516 503 aa10.87□□□□□ -0.67
CHMP1A-202ENST00000535997 ATRQ13535 2644 aa10.87□□□□□ -0.67
CHMP1A-202ENST00000535997 SPAG11BQ08648 103 aa10.87□□□□□ -0.67
CHMP1A-202ENST00000535997 UNQ6190/PRO20217Q6UXQ8 127 aa10.87□□□□□ -0.67
CHMP1A-202ENST00000535997 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 C10orf25Q5T742 122 aa10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 TEP1Q99973 2627 aaKnown RBP10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 LINC00846Q9NV44 126 aa10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 CYSRT1A8MQ03 144 aa10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 KLK12Q9UKR0 248 aa10.86□□□□□ -0.67
CHMP1A-202ENST00000535997 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
CHMP1A-202ENST00000535997 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
CHMP1A-202ENST00000535997 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
CHMP1A-202ENST00000535997 Q8NDZ9 215 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms