RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FHL2Q14192 279 aa12.7□□□□□ -0.38
RAB40C-203ENST00000535977 Q9H8V8 135 aa12.7□□□□□ -0.38
RAB40C-203ENST00000535977 NOP10Q9NPE3 64 aaKnown RBP12.7□□□□□ -0.38
RAB40C-203ENST00000535977 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
RAB40C-203ENST00000535977 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
RAB40C-203ENST00000535977 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
RAB40C-203ENST00000535977 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
RAB40C-203ENST00000535977 OVOL2Q9BRP0 275 aa12.69□□□□□ -0.38
RAB40C-203ENST00000535977 LINC00242Q5T6M2 205 aa12.69□□□□□ -0.38
RAB40C-203ENST00000535977 COPS9Q8WXC6 57 aa12.69□□□□□ -0.38
RAB40C-203ENST00000535977 C19orf73Q9NVV2 129 aa12.68□□□□□ -0.38
RAB40C-203ENST00000535977 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
RAB40C-203ENST00000535977 HILS1P60008 231 aa12.68□□□□□ -0.38
RAB40C-203ENST00000535977 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
RAB40C-203ENST00000535977 NTM-AS1Q6ZSK4 140 aa12.68□□□□□ -0.38
RAB40C-203ENST00000535977 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
RAB40C-203ENST00000535977 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
RAB40C-203ENST00000535977 F8P00451 2351 aa12.66□□□□□ -0.38
RAB40C-203ENST00000535977 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
RAB40C-203ENST00000535977 COX6A2Q02221 97 aa12.66□□□□□ -0.38
RAB40C-203ENST00000535977 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
RAB40C-203ENST00000535977 UBE2L6O14933 153 aa12.66□□□□□ -0.38
RAB40C-203ENST00000535977 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
RAB40C-203ENST00000535977 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
RAB40C-203ENST00000535977 PFN2P35080 140 aa12.64□□□□□ -0.39
RAB40C-203ENST00000535977 WNK1Q9H4A3 2382 aa12.62□□□□□ -0.39
RAB40C-203ENST00000535977 SMIM1B2RUZ4 78 aa12.62□□□□□ -0.39
RAB40C-203ENST00000535977 A0A087WYN8 130 aa12.61□□□□□ -0.39
RAB40C-203ENST00000535977 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
RAB40C-203ENST00000535977 LINC00336Q6ZUF6 198 aa12.61□□□□□ -0.39
RAB40C-203ENST00000535977 PRO0628Q9UI54 55 aa12.61□□□□□ -0.39
RAB40C-203ENST00000535977 NDUFC2O95298 119 aa12.6□□□□□ -0.39
RAB40C-203ENST00000535977 RPL28P46779 137 aaKnown RBP12.6□□□□□ -0.39
RAB40C-203ENST00000535977 WFDC10AQ9H1F0 79 aa12.6□□□□□ -0.39
RAB40C-203ENST00000535977 NDUFC2-KCTD14E9PQ53 114 aa12.59□□□□□ -0.39
RAB40C-203ENST00000535977 OBSCN-AS1Q96MR7 158 aa12.59□□□□□ -0.39
RAB40C-203ENST00000535977 GHRHP01286 108 aa12.59□□□□□ -0.39
RAB40C-203ENST00000535977 CUBNO60494 3623 aa12.58□□□□□ -0.4
RAB40C-203ENST00000535977 NIPBLQ6KC79 2804 aaeCLIP12.58□□□□□ -0.4
RAB40C-203ENST00000535977 NCR3O14931 201 aa12.57□□□□□ -0.4
RAB40C-203ENST00000535977 FAM236DA0A1B0GTK5 79 aa12.56□□□□□ -0.4
RAB40C-203ENST00000535977 FAM236CP0DP71 79 aa12.56□□□□□ -0.4
RAB40C-203ENST00000535977 WFDC9Q8NEX5 89 aa12.56□□□□□ -0.4
RAB40C-203ENST00000535977 SMR3AQ99954 134 aa12.56□□□□□ -0.4
RAB40C-203ENST00000535977 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 C20orf197Q8N268 126 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 LINC00337Q8N6G1 96 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 C1orf43Q9BWL3 253 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 TRAV13-2A0A0B4J235 113 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 CRPP02741 224 aa12.55□□□□□ -0.4
RAB40C-203ENST00000535977 PF4P02776 101 aa12.54□□□□□ -0.4
RAB40C-203ENST00000535977 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
RAB40C-203ENST00000535977 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
RAB40C-203ENST00000535977 EPM2AB3EWF7 344 aa12.53□□□□□ -0.4
RAB40C-203ENST00000535977 SMIM11BQ8TCY0 68 aa12.53□□□□□ -0.4
RAB40C-203ENST00000535977 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
RAB40C-203ENST00000535977 LINC00482Q8N8I6 264 aa12.52□□□□□ -0.41
RAB40C-203ENST00000535977 IGKV2-28A0A075B6P5 120 aa12.52□□□□□ -0.41
RAB40C-203ENST00000535977 IGKV2D-28P01615 120 aa12.52□□□□□ -0.41
RAB40C-203ENST00000535977 XCL1P47992 114 aa12.52□□□□□ -0.41
RAB40C-203ENST00000535977 SETD2Q9BYW2 2564 aaPredicted RBP12.52□□□□□ -0.41
RAB40C-203ENST00000535977 SERP1Q9Y6X1 66 aa12.51□□□□□ -0.41
RAB40C-203ENST00000535977 LECT2O14960 151 aa12.51□□□□□ -0.41
RAB40C-203ENST00000535977 FAM19A1Q7Z5A9 133 aa12.51□□□□□ -0.41
RAB40C-203ENST00000535977 SLPIP03973 132 aa12.5□□□□□ -0.41
RAB40C-203ENST00000535977 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
RAB40C-203ENST00000535977 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
RAB40C-203ENST00000535977 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
RAB40C-203ENST00000535977 CCKP06307 115 aa12.48□□□□□ -0.41
RAB40C-203ENST00000535977 NSD1Q96L73 2696 aaPredicted RBP12.48□□□□□ -0.41
RAB40C-203ENST00000535977 F8WDY8 70 aa12.47□□□□□ -0.41
RAB40C-203ENST00000535977 ENHOQ6UWT2 76 aa12.47□□□□□ -0.41
RAB40C-203ENST00000535977 KRTAP10-3P60369 221 aa12.47□□□□□ -0.41
RAB40C-203ENST00000535977 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
RAB40C-203ENST00000535977 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
RAB40C-203ENST00000535977 H0YGX0 51 aa12.46□□□□□ -0.41
RAB40C-203ENST00000535977 H7BZZ5 65 aa12.46□□□□□ -0.41
RAB40C-203ENST00000535977 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
RAB40C-203ENST00000535977 SS18Q15532 418 aa12.46□□□□□ -0.41
RAB40C-203ENST00000535977 NF1P21359 2839 aa12.46□□□□□ -0.42
RAB40C-203ENST00000535977 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.42
RAB40C-203ENST00000535977 DEFB130BP0DP73 79 aa12.46□□□□□ -0.42
RAB40C-203ENST00000535977 DEFB130AP0DP74 79 aa12.46□□□□□ -0.42
RAB40C-203ENST00000535977 C9orf66Q5T8R8 295 aa12.46□□□□□ -0.42
RAB40C-203ENST00000535977 A0A087WZ39 114 aa12.45□□□□□ -0.42
RAB40C-203ENST00000535977 FN1P02751 2386 aaKnown RBP12.45□□□□□ -0.42
RAB40C-203ENST00000535977 ANK3Q12955 4377 aaKnown RBP12.44□□□□□ -0.42
RAB40C-203ENST00000535977 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
RAB40C-203ENST00000535977 S100A7L2Q5SY68 101 aa12.44□□□□□ -0.42
RAB40C-203ENST00000535977 PRO0255Q9UI72 69 aa12.44□□□□□ -0.42
RAB40C-203ENST00000535977 ATP5EP2Q5VTU8 51 aa12.43□□□□□ -0.42
RAB40C-203ENST00000535977 FP248Q71RG6 208 aaPredicted RBP12.43□□□□□ -0.42
RAB40C-203ENST00000535977 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
RAB40C-203ENST00000535977 X6R8D5 127 aa12.43□□□□□ -0.42
RAB40C-203ENST00000535977 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
RAB40C-203ENST00000535977 LY6G6DO95868 133 aa12.42□□□□□ -0.42
RAB40C-203ENST00000535977 GYPEP15421 78 aa12.42□□□□□ -0.42
RAB40C-203ENST00000535977 IBA57-AS1B1ANH7 110 aa12.42□□□□□ -0.42
RAB40C-203ENST00000535977 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms