RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
CCDC60-202ENST00000535685 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
CCDC60-202ENST00000535685 TRBV30A0A0K0K1B3 111 aa6.64□□□□□ -1.35
CCDC60-202ENST00000535685 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
CCDC60-202ENST00000535685 UNQ6190/PRO20217Q6UXQ8 127 aa6.64□□□□□ -1.35
CCDC60-202ENST00000535685 ADCYAP1P18509 176 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 Q6ZN92 141 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 VCX2Q9H322 139 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
CCDC60-202ENST00000535685 SEC11AP67812 179 aa6.62□□□□□ -1.35
CCDC60-202ENST00000535685 LINC01546A6NGU7 62 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 MT-ND6P03923 174 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
CCDC60-202ENST00000535685 TOMM6Q96B49 74 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 SEC11CQ9BY50 192 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
CCDC60-202ENST00000535685 HERVK_113P63121 156 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 COX19Q49B96 90 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 Q8IZM0 81 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-202ENST00000535685 GNB1LQ9BYB4 327 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
CCDC60-202ENST00000535685 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
CCDC60-202ENST00000535685 ZC2HC1BQ5TFG8 222 aa6.59□□□□□ -1.35
CCDC60-202ENST00000535685 C2orf82Q6UX34 121 aa6.59□□□□□ -1.35
CCDC60-202ENST00000535685 ERASQ7Z444 233 aa6.59□□□□□ -1.35
CCDC60-202ENST00000535685 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
CCDC60-202ENST00000535685 LRP2P98164 4655 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 GAGE10A6NGK3 116 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 KIAA1644Q3SXP7 199 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 C10orf91Q5T1B1 145 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
CCDC60-202ENST00000535685 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 PRSS2P07478 247 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 S100PP25815 95 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 C9orf129Q5T035 196 aaKnown RBP6.57□□□□□ -1.36
CCDC60-202ENST00000535685 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 DIRC1Q969H9 104 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 ALKBH7Q9BT30 221 aaPredicted RBP6.57□□□□□ -1.36
CCDC60-202ENST00000535685 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
CCDC60-202ENST00000535685 CXCL5P42830 114 aa6.56□□□□□ -1.36
CCDC60-202ENST00000535685 CKS1BP61024 79 aa6.56□□□□□ -1.36
CCDC60-202ENST00000535685 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
CCDC60-202ENST00000535685 FAM19A5Q7Z5A7 132 aaPredicted RBP6.56□□□□□ -1.36
CCDC60-202ENST00000535685 SCGB3A1Q96QR1 104 aa6.56□□□□□ -1.36
CCDC60-202ENST00000535685 GEMIN7Q9H840 131 aaKnown RBP6.56□□□□□ -1.36
CCDC60-202ENST00000535685 CARHSP1Q9Y2V2 147 aaKnown RBP6.56□□□□□ -1.36
CCDC60-202ENST00000535685 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
CCDC60-202ENST00000535685 F8VRH5 84 aa6.55□□□□□ -1.36
CCDC60-202ENST00000535685 M0QXV9 152 aa6.55□□□□□ -1.36
CCDC60-202ENST00000535685 RHEBQ15382 184 aa6.55□□□□□ -1.36
CCDC60-202ENST00000535685 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
CCDC60-202ENST00000535685 H0Y9J4 135 aa6.54□□□□□ -1.36
CCDC60-202ENST00000535685 SCGB1D1O95968 90 aa6.54□□□□□ -1.36
CCDC60-202ENST00000535685 TOMM7Q9P0U1 55 aa6.54□□□□□ -1.36
CCDC60-202ENST00000535685 TP73-AS1Q9UF72 201 aa6.54□□□□□ -1.36
CCDC60-202ENST00000535685 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
CCDC60-202ENST00000535685 CST9LQ9H4G1 147 aa6.53□□□□□ -1.36
CCDC60-202ENST00000535685 IGLV1-50A0A075B6I6 118 aa6.52□□□□□ -1.37
CCDC60-202ENST00000535685 UBE2BP63146 152 aa6.52□□□□□ -1.37
CCDC60-202ENST00000535685 PMVKQ15126 192 aa6.52□□□□□ -1.37
CCDC60-202ENST00000535685 LINC00469Q8N7U9 141 aa6.52□□□□□ -1.37
CCDC60-202ENST00000535685 NUPR1O60356 82 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 FABP9Q0Z7S8 132 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CCDC60-202ENST00000535685 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 SVBPQ8N300 66 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
CCDC60-202ENST00000535685 APOC3P02656 99 aa6.5□□□□□ -1.37
CCDC60-202ENST00000535685 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
CCDC60-202ENST00000535685 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
CCDC60-202ENST00000535685 ZNF861PO60384 105 aa6.49□□□□□ -1.37
CCDC60-202ENST00000535685 SNAPINO95295 136 aa6.49□□□□□ -1.37
CCDC60-202ENST00000535685 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
CCDC60-202ENST00000535685 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
CCDC60-202ENST00000535685 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 A0A096LNJ9 63 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 H3BRM9 83 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 IGLC3P0DOY3 106 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
CCDC60-202ENST00000535685 C18orf32Q8TCD1 76 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
CCDC60-202ENST00000535685 LINC00614P0C842 121 aa6.47□□□□□ -1.37
CCDC60-202ENST00000535685 RPL13AP40429 203 aaKnown RBP6.47□□□□□ -1.37
CCDC60-202ENST00000535685 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
CCDC60-202ENST00000535685 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
CCDC60-202ENST00000535685 SCO1O75880 301 aa6.46□□□□□ -1.38
CCDC60-202ENST00000535685 HBDP02042 147 aa6.46□□□□□ -1.38
CCDC60-202ENST00000535685 SPINK8P0C7L1 97 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms