RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 LINC00158P58513 81 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 RPL36AP83881 106 aaKnown RBP6.55□□□□□ -1.36
SF3B2-216ENST00000534765 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 C5orf38Q86SI9 138 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 RPL36ALQ969Q0 106 aaKnown RBP6.55□□□□□ -1.36
SF3B2-216ENST00000534765 NDUFA4O00483 81 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 PAX4O43316 350 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 UPK3BQ9BT76 320 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 UBL5Q9BZL1 73 aa6.55□□□□□ -1.36
SF3B2-216ENST00000534765 LYSTQ99698 3801 aa6.54□□□□□ -1.36
SF3B2-216ENST00000534765 SCXQ7RTU7 201 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 USMG5Q96IX5 58 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
SF3B2-216ENST00000534765 MGAM2Q2M2H8 2515 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 A0A087WZ39 114 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 INAFM1C9JVW0 142 aa6.53□□□□□ -1.36
SF3B2-216ENST00000534765 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 STAB1Q9NY15 2570 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 H3BUA1 57 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
SF3B2-216ENST00000534765 Q6JHZ5 121 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 LINC01006Q8NI28 216 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 AMELXQ99217 191 aa6.52□□□□□ -1.37
SF3B2-216ENST00000534765 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
SF3B2-216ENST00000534765 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
SF3B2-216ENST00000534765 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
SF3B2-216ENST00000534765 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
SF3B2-216ENST00000534765 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
SF3B2-216ENST00000534765 COX8CQ7Z4L0 72 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 CDKN2A-AS1Q9UH64 79 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 LAMTOR3Q9UHA4 124 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 IGHV3-53P01767 116 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
SF3B2-216ENST00000534765 SPTSSBQ8NFR3 76 aa6.49□□□□□ -1.37
SF3B2-216ENST00000534765 DEFB121Q5J5C9 76 aa6.49□□□□□ -1.37
SF3B2-216ENST00000534765 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
SF3B2-216ENST00000534765 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
SF3B2-216ENST00000534765 VSIG2Q96IQ7 327 aa6.48□□□□□ -1.37
SF3B2-216ENST00000534765 A0A087WYN8 130 aa6.48□□□□□ -1.37
SF3B2-216ENST00000534765 WFDC10AQ9H1F0 79 aa6.48□□□□□ -1.37
SF3B2-216ENST00000534765 PSPHP1O15172 72 aa6.47□□□□□ -1.37
SF3B2-216ENST00000534765 C9orf129Q5T035 196 aaKnown RBP6.47□□□□□ -1.37
SF3B2-216ENST00000534765 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
SF3B2-216ENST00000534765 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
SF3B2-216ENST00000534765 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
SF3B2-216ENST00000534765 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
SF3B2-216ENST00000534765 UBE2D4Q9Y2X8 147 aa6.47□□□□□ -1.37
SF3B2-216ENST00000534765 CCKP06307 115 aa6.46□□□□□ -1.37
SF3B2-216ENST00000534765 ORMDL1Q9P0S3 153 aa6.46□□□□□ -1.37
SF3B2-216ENST00000534765 K7EQG2 157 aa6.46□□□□□ -1.38
SF3B2-216ENST00000534765 PRR4Q16378 134 aa6.46□□□□□ -1.38
SF3B2-216ENST00000534765 K7EMT4 169 aa6.45□□□□□ -1.38
SF3B2-216ENST00000534765 RNASE3P12724 160 aaKnown RBP6.45□□□□□ -1.38
SF3B2-216ENST00000534765 SPINK13Q1W4C9 94 aa6.45□□□□□ -1.38
SF3B2-216ENST00000534765 C4orf3Q8WVX3 66 aa6.45□□□□□ -1.38
SF3B2-216ENST00000534765 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
SF3B2-216ENST00000534765 PROK1P58294 105 aa6.45□□□□□ -1.38
SF3B2-216ENST00000534765 FP248Q71RG6 208 aaPredicted RBP6.44□□□□□ -1.38
SF3B2-216ENST00000534765 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 DYNLRB2Q8TF09 96 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 Q9UF83 564 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
SF3B2-216ENST00000534765 LITAFQ99732 161 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 TMEM89A2RUT3 159 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 MRPL53Q96EL3 112 aaKnown RBP6.44□□□□□ -1.38
SF3B2-216ENST00000534765 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
SF3B2-216ENST00000534765 IGHV4-4A0A075B6R2 117 aa6.43□□□□□ -1.38
SF3B2-216ENST00000534765 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
SF3B2-216ENST00000534765 A0A0J9YX75 114 aa6.43□□□□□ -1.38
SF3B2-216ENST00000534765 KLLNB2CW77 178 aa6.43□□□□□ -1.38
SF3B2-216ENST00000534765 H7BZZ5 65 aa6.43□□□□□ -1.38
SF3B2-216ENST00000534765 DEFB114Q30KQ6 69 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 TRAV7A0A075B6U4 112 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 HTN3P15516 51 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
SF3B2-216ENST00000534765 ODF3L2Q3SX64 289 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 Q6ZTI0 123 aa6.42□□□□□ -1.38
SF3B2-216ENST00000534765 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 MIFP14174 115 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 CCL24O00175 119 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 DEFB131AP59861 70 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 C16orf95Q9H693 158 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 COL6A5A8TX70 2615 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 M0QY20 66 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 UBE2L6O14933 153 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
SF3B2-216ENST00000534765 DNHD1Q96M86 4753 aa6.4□□□□□ -1.38
SF3B2-216ENST00000534765 FAM222AQ5U5X8 452 aa6.4□□□□□ -1.39
SF3B2-216ENST00000534765 MAP6D1Q9H9H5 199 aa6.4□□□□□ -1.39
SF3B2-216ENST00000534765 LINC00467Q9BRT7 94 aa6.4□□□□□ -1.39
SF3B2-216ENST00000534765 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 GIG44P09565 113 aaPredicted RBP6.39□□□□□ -1.39
SF3B2-216ENST00000534765 LINC00315P59091 139 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms