RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 MIR7-3HGQ8N6C7 128 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 BRK1Q8WUW1 75 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 EPG5Q9HCE0 2579 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 DEFB114Q30KQ6 69 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 LINC00242Q5T6M2 205 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 FAM19A3Q7Z5A8 133 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
SMPD1-210ENST00000534405 LECT2O14960 151 aa13.54□□□□□ -0.24
SMPD1-210ENST00000534405 DYNLRB2Q8TF09 96 aa13.54□□□□□ -0.24
SMPD1-210ENST00000534405 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
SMPD1-210ENST00000534405 CHD6Q8TD26 2715 aa13.53□□□□□ -0.24
SMPD1-210ENST00000534405 A0A0U1RQV1 116 aa13.52□□□□□ -0.24
SMPD1-210ENST00000534405 NBPF19A0A087WUL8 3843 aa13.52□□□□□ -0.24
SMPD1-210ENST00000534405 WNK1Q9H4A3 2382 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 CUBNO60494 3623 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 TRBV7-6A0A0J9YX20 115 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 ORMDL1Q9P0S3 153 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 LINC00474Q9P2X8 69 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 APCP25054 2843 aa13.52□□□□□ -0.25
SMPD1-210ENST00000534405 IGHV3-38A0A0C4DH36 116 aa13.51□□□□□ -0.25
SMPD1-210ENST00000534405 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
SMPD1-210ENST00000534405 C11orf44Q8N8P7 122 aa13.5□□□□□ -0.25
SMPD1-210ENST00000534405 ITPR3Q14573 2671 aa13.49□□□□□ -0.25
SMPD1-210ENST00000534405 F8WEM9 126 aa13.49□□□□□ -0.25
SMPD1-210ENST00000534405 JMJD7-PLA2G4BH0Y9G9 81 aa13.49□□□□□ -0.25
SMPD1-210ENST00000534405 ODF3L2Q3SX64 289 aa13.49□□□□□ -0.25
SMPD1-210ENST00000534405 ATP5EP56381 51 aaPredicted RBP13.49□□□□□ -0.25
SMPD1-210ENST00000534405 INSP01308 110 aa13.48□□□□□ -0.25
SMPD1-210ENST00000534405 IGHV3-53P01767 116 aa13.48□□□□□ -0.25
SMPD1-210ENST00000534405 SLPIP03973 132 aa13.48□□□□□ -0.25
SMPD1-210ENST00000534405 RMI2Q96E14 147 aa13.48□□□□□ -0.25
SMPD1-210ENST00000534405 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
SMPD1-210ENST00000534405 NF1P21359 2839 aa13.47□□□□□ -0.25
SMPD1-210ENST00000534405 RPL36AP83881 106 aaKnown RBP13.47□□□□□ -0.25
SMPD1-210ENST00000534405 RPL36ALQ969Q0 106 aaKnown RBP13.47□□□□□ -0.25
SMPD1-210ENST00000534405 UBL5Q9BZL1 73 aa13.47□□□□□ -0.25
SMPD1-210ENST00000534405 NDUFC1O43677 76 aa13.47□□□□□ -0.25
SMPD1-210ENST00000534405 RBM3P98179 157 aaKnown RBP13.47□□□□□ -0.25
SMPD1-210ENST00000534405 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
SMPD1-210ENST00000534405 SNURFQ9Y675 71 aa13.46□□□□□ -0.25
SMPD1-210ENST00000534405 LINC00167Q96N53 147 aa13.45□□□□□ -0.26
SMPD1-210ENST00000534405 CCDC168Q8NDH2 2452 aa13.45□□□□□ -0.26
SMPD1-210ENST00000534405 C1orf158Q8N1D5 194 aa13.44□□□□□ -0.26
SMPD1-210ENST00000534405 DNAJC9-AS1A6NH13 148 aa13.44□□□□□ -0.26
SMPD1-210ENST00000534405 LINC00482Q8N8I6 264 aa13.43□□□□□ -0.26
SMPD1-210ENST00000534405 ESM1Q9NQ30 184 aa13.43□□□□□ -0.26
SMPD1-210ENST00000534405 SETD2Q9BYW2 2564 aaPredicted RBP13.41□□□□□ -0.26
SMPD1-210ENST00000534405 FLNAP21333 2647 aaKnown RBP13.41□□□□□ -0.26
SMPD1-210ENST00000534405 STHQ8IWL8 128 aa13.41□□□□□ -0.26
SMPD1-210ENST00000534405 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
SMPD1-210ENST00000534405 IL17DQ8TAD2 202 aa13.4□□□□□ -0.26
SMPD1-210ENST00000534405 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
SMPD1-210ENST00000534405 CCL24O00175 119 aa13.39□□□□□ -0.27
SMPD1-210ENST00000534405 CCL18P55774 89 aa13.39□□□□□ -0.27
SMPD1-210ENST00000534405 TRAV10A0A0B4J240 114 aa13.39□□□□□ -0.27
SMPD1-210ENST00000534405 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
SMPD1-210ENST00000534405 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
SMPD1-210ENST00000534405 LY6G6DO95868 133 aa13.37□□□□□ -0.27
SMPD1-210ENST00000534405 TMEM256-PLSCR3K7ERE1 68 aa13.37□□□□□ -0.27
SMPD1-210ENST00000534405 Q6ZTI0 123 aa13.37□□□□□ -0.27
SMPD1-210ENST00000534405 C2CD3Q4AC94 2353 aa13.35□□□□□ -0.27
SMPD1-210ENST00000534405 SETXQ7Z333 2677 aaKnown RBP13.34□□□□□ -0.27
SMPD1-210ENST00000534405 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
SMPD1-210ENST00000534405 ACANP16112 2415 aa13.34□□□□□ -0.27
SMPD1-210ENST00000534405 TRBV7-4A0A0J9YYF1 115 aa13.33□□□□□ -0.27
SMPD1-210ENST00000534405 IBA57-AS1B1ANH7 110 aa13.33□□□□□ -0.27
SMPD1-210ENST00000534405 LINC00158P58513 81 aa13.33□□□□□ -0.27
SMPD1-210ENST00000534405 COX7B2Q8TF08 81 aa13.33□□□□□ -0.27
SMPD1-210ENST00000534405 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.27
SMPD1-210ENST00000534405 GIG44P09565 113 aaPredicted RBP13.33□□□□□ -0.28
SMPD1-210ENST00000534405 LINC01547P58512 204 aaPredicted RBP13.33□□□□□ -0.28
SMPD1-210ENST00000534405 FAM229BQ4G0N7 80 aa13.33□□□□□ -0.28
SMPD1-210ENST00000534405 MIFP14174 115 aa13.32□□□□□ -0.28
SMPD1-210ENST00000534405 Q8N814 137 aa13.32□□□□□ -0.28
SMPD1-210ENST00000534405 TRBV6-4A0A1B0GX49 114 aa13.31□□□□□ -0.28
SMPD1-210ENST00000534405 K7EQD1 137 aa13.31□□□□□ -0.28
SMPD1-210ENST00000534405 CDC42SE2Q9NRR3 84 aa13.31□□□□□ -0.28
SMPD1-210ENST00000534405 NOP10Q9NPE3 64 aaKnown RBP13.3□□□□□ -0.28
SMPD1-210ENST00000534405 MTORP42345 2549 aa13.3□□□□□ -0.28
SMPD1-210ENST00000534405 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
SMPD1-210ENST00000534405 LINC01006Q8NI28 216 aa13.3□□□□□ -0.28
SMPD1-210ENST00000534405 MPLKIPQ8TAP9 179 aa13.3□□□□□ -0.28
SMPD1-210ENST00000534405 PAX4O43316 350 aa13.29□□□□□ -0.28
SMPD1-210ENST00000534405 Q6ZQT0 140 aa13.29□□□□□ -0.28
SMPD1-210ENST00000534405 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
SMPD1-210ENST00000534405 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
SMPD1-210ENST00000534405 TENM4Q6N022 2769 aa13.27□□□□□ -0.28
SMPD1-210ENST00000534405 CXCL6P80162 114 aa13.27□□□□□ -0.29
SMPD1-210ENST00000534405 PMAIP1Q13794 54 aa13.27□□□□□ -0.29
SMPD1-210ENST00000534405 PRR15Q8IV56 129 aa13.27□□□□□ -0.29
SMPD1-210ENST00000534405 TM2D3Q9BRN9 247 aa13.27□□□□□ -0.29
SMPD1-210ENST00000534405 LOC110117498A0A087WWA1 95 aa13.26□□□□□ -0.29
SMPD1-210ENST00000534405 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
SMPD1-210ENST00000534405 PDZD2O15018 2839 aa13.26□□□□□ -0.29
SMPD1-210ENST00000534405 C6orf226Q5I0X4 101 aa13.25□□□□□ -0.29
SMPD1-210ENST00000534405 Q6ZVQ6 151 aa13.25□□□□□ -0.29
SMPD1-210ENST00000534405 C19orf73Q9NVV2 129 aa13.25□□□□□ -0.29
SMPD1-210ENST00000534405 ANK3Q12955 4377 aaKnown RBP13.25□□□□□ -0.29
SMPD1-210ENST00000534405 LOC100131303A0A0U1RQF7 123 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms