RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 NPC2P61916 151 aa4.85□□□□□ -1.63
RNPC3-209ENST00000533834 NTN5Q8WTR8 489 aaPredicted RBP4.85□□□□□ -1.63
RNPC3-209ENST00000533834 TRACP01848 142 aa4.84□□□□□ -1.63
RNPC3-209ENST00000533834 KHDC1LQ5JSQ8 128 aa4.84□□□□□ -1.63
RNPC3-209ENST00000533834 GEMIN7Q9H840 131 aaKnown RBP4.84□□□□□ -1.63
RNPC3-209ENST00000533834 IBA57-AS1B1ANH7 110 aa4.84□□□□□ -1.63
RNPC3-209ENST00000533834 Q8IZM0 81 aa4.84□□□□□ -1.63
RNPC3-209ENST00000533834 TRAV13-1A0A0B4J241 112 aa4.84□□□□□ -1.64
RNPC3-209ENST00000533834 TRBV7-7A0A0K0K1E9 115 aa4.84□□□□□ -1.64
RNPC3-209ENST00000533834 SMAGPQ0VAQ4 97 aa4.84□□□□□ -1.64
RNPC3-209ENST00000533834 PF4P02776 101 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 A0A087WYN8 130 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 TENM3Q9P273 2699 aa4.83□□□□□ -1.64
RNPC3-209ENST00000533834 TLN2Q9Y4G6 2542 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 MRPL23Q16540 153 aaKnown RBP4.82□□□□□ -1.64
RNPC3-209ENST00000533834 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 STARD9Q9P2P6 4700 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 TEP1Q99973 2627 aaKnown RBP4.82□□□□□ -1.64
RNPC3-209ENST00000533834 JMJD1CQ15652 2540 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
RNPC3-209ENST00000533834 GAGE6Q13070 117 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 SMIM11BQ8TCY0 68 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 DNAH6Q9C0G6 4158 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 NOTCH3Q9UM47 2321 aa4.82□□□□□ -1.64
RNPC3-209ENST00000533834 FBN3Q75N90 2809 aa4.81□□□□□ -1.64
RNPC3-209ENST00000533834 KRTAP10-11P60412 298 aa4.81□□□□□ -1.64
RNPC3-209ENST00000533834 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
RNPC3-209ENST00000533834 UBE2WQ96B02 151 aa4.81□□□□□ -1.64
RNPC3-209ENST00000533834 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
RNPC3-209ENST00000533834 INAFM1C9JVW0 142 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 ENHOQ6UWT2 76 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 PRIMA1Q86XR5 153 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 ACANP16112 2415 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 A0A096LPF7 62 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 H7C2G1 150 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 NDUFC2O95298 119 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 GYPEP15421 78 aa4.8□□□□□ -1.64
RNPC3-209ENST00000533834 FN1P02751 2386 aaKnown RBP4.8□□□□□ -1.64
RNPC3-209ENST00000533834 TRGV2A0A075B6R0 118 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 GVQW2A0A096LPI5 108 aaPredicted RBP4.79□□□□□ -1.64
RNPC3-209ENST00000533834 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 J3QR89 54 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 IGHV4-30-4P0DP06 118 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 SONP18583 2426 aaKnown RBP4.79□□□□□ -1.64
RNPC3-209ENST00000533834 SCGB1C2P0DMR2 95 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 C9orf66Q5T8R8 295 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 CCDC168Q8NDH2 2452 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 MAST4O15021 2626 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 TRGV4A0A0C4DH28 118 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
RNPC3-209ENST00000533834 FASNP49327 2511 aaKnown RBP4.78□□□□□ -1.64
RNPC3-209ENST00000533834 PRSS2P07478 247 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 COX17Q14061 63 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 MEIG1Q5JSS6 88 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 KLK5Q9Y337 293 aaPredicted RBP4.78□□□□□ -1.64
RNPC3-209ENST00000533834 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 PAX4O43316 350 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 LYPD5Q6UWN5 251 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 SND1-IT1Q9HBX3 110 aa4.78□□□□□ -1.64
RNPC3-209ENST00000533834 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
RNPC3-209ENST00000533834 H3BNG1 76 aa4.77□□□□□ -1.65
RNPC3-209ENST00000533834 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
RNPC3-209ENST00000533834 MIFP14174 115 aa4.77□□□□□ -1.65
RNPC3-209ENST00000533834 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
RNPC3-209ENST00000533834 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 A0A1B0GX51 115 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 UBE2L6O14933 153 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 DEFB130BP0DP73 79 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 DEFB130AP0DP74 79 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
RNPC3-209ENST00000533834 WNK1Q9H4A3 2382 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 A0A0U1RRA0 63 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 MALP21145 153 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 NDUFV3P56181 108 aaKnown RBP4.75□□□□□ -1.65
RNPC3-209ENST00000533834 LELP1Q5T871 98 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 CHCHD10Q8WYQ3 142 aaPredicted RBP4.75□□□□□ -1.65
RNPC3-209ENST00000533834 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 PRR3P79522 188 aaKnown RBP4.75□□□□□ -1.65
RNPC3-209ENST00000533834 C2orf48Q96LS8 159 aa4.75□□□□□ -1.65
RNPC3-209ENST00000533834 CKS1BP61024 79 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 C6orf223Q8N319 242 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 C11orf68Q9H3H3 251 aaKnown RBP4.74□□□□□ -1.65
RNPC3-209ENST00000533834 PKD1P98161 4303 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 DEFB4AO15263 64 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 REG3AQ06141 175 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 C9orf116Q5BN46 136 aaPredicted RBP4.74□□□□□ -1.65
RNPC3-209ENST00000533834 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 Q9HAA7 133 aa4.74□□□□□ -1.65
RNPC3-209ENST00000533834 KRTAP7-1Q8IUC3 87 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms