RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 SS18Q15532 418 aa13.35□□□□□ -0.27
UBXN1-215ENST00000533476 C5orf38Q86SI9 138 aa13.35□□□□□ -0.27
UBXN1-215ENST00000533476 CELA1Q9UNI1 258 aa13.33□□□□□ -0.28
UBXN1-215ENST00000533476 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
UBXN1-215ENST00000533476 ATP5G1P05496 136 aa13.33□□□□□ -0.28
UBXN1-215ENST00000533476 FAM240AA0A1B0GVK7 77 aa13.32□□□□□ -0.28
UBXN1-215ENST00000533476 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
UBXN1-215ENST00000533476 MRPL23Q16540 153 aaKnown RBP13.32□□□□□ -0.28
UBXN1-215ENST00000533476 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
UBXN1-215ENST00000533476 IBA57-AS1B1ANH7 110 aa13.31□□□□□ -0.28
UBXN1-215ENST00000533476 LINC01561Q8N1V8 128 aa13.31□□□□□ -0.28
UBXN1-215ENST00000533476 NBEAL2Q6ZNJ1 2754 aa13.31□□□□□ -0.28
UBXN1-215ENST00000533476 SPART-AS1P0CW21 52 aa13.31□□□□□ -0.28
UBXN1-215ENST00000533476 XCL1P47992 114 aa13.31□□□□□ -0.28
UBXN1-215ENST00000533476 Q6Q795 121 aa13.3□□□□□ -0.28
UBXN1-215ENST00000533476 TRACP01848 142 aa13.29□□□□□ -0.28
UBXN1-215ENST00000533476 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
UBXN1-215ENST00000533476 SNCGO76070 127 aa13.29□□□□□ -0.28
UBXN1-215ENST00000533476 LINC00158P58513 81 aa13.29□□□□□ -0.28
UBXN1-215ENST00000533476 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
UBXN1-215ENST00000533476 Q8IZM0 81 aa13.28□□□□□ -0.28
UBXN1-215ENST00000533476 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
UBXN1-215ENST00000533476 C6orf226Q5I0X4 101 aa13.26□□□□□ -0.29
UBXN1-215ENST00000533476 LINC00269Q8N2A0 174 aa13.26□□□□□ -0.29
UBXN1-215ENST00000533476 CRPP02741 224 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 RPL28P46779 137 aaKnown RBP13.25□□□□□ -0.29
UBXN1-215ENST00000533476 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 GAGE2EQ4V326 116 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 CD164L2Q6UWJ8 174 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 GAGE2DQ9UEU5 116 aa13.25□□□□□ -0.29
UBXN1-215ENST00000533476 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
UBXN1-215ENST00000533476 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
UBXN1-215ENST00000533476 CCL18P55774 89 aa13.24□□□□□ -0.29
UBXN1-215ENST00000533476 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
UBXN1-215ENST00000533476 PFN2P35080 140 aa13.23□□□□□ -0.29
UBXN1-215ENST00000533476 LINC00337Q8N6G1 96 aa13.23□□□□□ -0.29
UBXN1-215ENST00000533476 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
UBXN1-215ENST00000533476 ACYP1P07311 99 aa13.22□□□□□ -0.29
UBXN1-215ENST00000533476 HTN3P15516 51 aa13.22□□□□□ -0.29
UBXN1-215ENST00000533476 REG3AQ06141 175 aa13.22□□□□□ -0.29
UBXN1-215ENST00000533476 LELP1Q5T871 98 aa13.22□□□□□ -0.29
UBXN1-215ENST00000533476 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
UBXN1-215ENST00000533476 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
UBXN1-215ENST00000533476 Q8N3U1 123 aa13.21□□□□□ -0.29
UBXN1-215ENST00000533476 KRTAP24-1Q3LI83 254 aa13.19□□□□□ -0.3
UBXN1-215ENST00000533476 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
UBXN1-215ENST00000533476 CXCL5P42830 114 aa13.18□□□□□ -0.3
UBXN1-215ENST00000533476 KIAA0087Q14695 138 aa13.18□□□□□ -0.3
UBXN1-215ENST00000533476 ANAPC13Q9BS18 74 aa13.18□□□□□ -0.3
UBXN1-215ENST00000533476 BAALC-AS2P0C853 105 aa13.17□□□□□ -0.3
UBXN1-215ENST00000533476 KRTAP10-11P60412 298 aa13.17□□□□□ -0.3
UBXN1-215ENST00000533476 OXLD1Q5BKU9 147 aa13.17□□□□□ -0.3
UBXN1-215ENST00000533476 IGLV10-54A0A075B6I4 117 aa13.16□□□□□ -0.3
UBXN1-215ENST00000533476 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
UBXN1-215ENST00000533476 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.3
UBXN1-215ENST00000533476 TRRAPQ9Y4A5 3859 aa13.15□□□□□ -0.3
UBXN1-215ENST00000533476 H0YGX0 51 aa13.15□□□□□ -0.3
UBXN1-215ENST00000533476 MALP21145 153 aa13.15□□□□□ -0.3
UBXN1-215ENST00000533476 NDUFV3P56181 108 aaKnown RBP13.14□□□□□ -0.31
UBXN1-215ENST00000533476 EGFEM1PQ0D2K5 195 aa13.14□□□□□ -0.31
UBXN1-215ENST00000533476 SMIM11BQ8TCY0 68 aa13.14□□□□□ -0.31
UBXN1-215ENST00000533476 COX17Q14061 63 aa13.13□□□□□ -0.31
UBXN1-215ENST00000533476 TTC32Q5I0X7 151 aa13.13□□□□□ -0.31
UBXN1-215ENST00000533476 PRR34Q9NV39 138 aa13.13□□□□□ -0.31
UBXN1-215ENST00000533476 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
UBXN1-215ENST00000533476 TRBV7-7A0A0K0K1E9 115 aa13.12□□□□□ -0.31
UBXN1-215ENST00000533476 NHLRC4P0CG21 123 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-215ENST00000533476 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
UBXN1-215ENST00000533476 MDFIQ99750 246 aa13.11□□□□□ -0.31
UBXN1-215ENST00000533476 RETNQ9HD89 108 aa13.11□□□□□ -0.31
UBXN1-215ENST00000533476 LYPD5Q6UWN5 251 aa13.11□□□□□ -0.31
UBXN1-215ENST00000533476 H3BNG1 76 aa13.1□□□□□ -0.31
UBXN1-215ENST00000533476 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-215ENST00000533476 SDIM1Q6ZPB5 146 aa13.09□□□□□ -0.31
UBXN1-215ENST00000533476 IMUPQ9GZP8 106 aa13.09□□□□□ -0.31
UBXN1-215ENST00000533476 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
UBXN1-215ENST00000533476 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
UBXN1-215ENST00000533476 OR13C6PQ8NH95 151 aa13.07□□□□□ -0.32
UBXN1-215ENST00000533476 NDUFC2O95298 119 aa13.07□□□□□ -0.32
UBXN1-215ENST00000533476 ENHOQ6UWT2 76 aa13.07□□□□□ -0.32
UBXN1-215ENST00000533476 DNAL4O96015 105 aa13.06□□□□□ -0.32
UBXN1-215ENST00000533476 SPAG11BQ08648 103 aa13.05□□□□□ -0.32
UBXN1-215ENST00000533476 LINC00643Q86TS7 51 aa13.05□□□□□ -0.32
UBXN1-215ENST00000533476 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
UBXN1-215ENST00000533476 A0A087WYN8 130 aa13.04□□□□□ -0.32
UBXN1-215ENST00000533476 Q9HAA7 133 aa13.04□□□□□ -0.32
UBXN1-215ENST00000533476 C9orf116Q5BN46 136 aaPredicted RBP13.03□□□□□ -0.32
UBXN1-215ENST00000533476 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
UBXN1-215ENST00000533476 Q6ZTC4 211 aa13.03□□□□□ -0.32
UBXN1-215ENST00000533476 OBSCN-AS1Q96MR7 158 aa13.01□□□□□ -0.33
UBXN1-215ENST00000533476 A0A0J9YWU9 116 aa13.01□□□□□ -0.33
UBXN1-215ENST00000533476 C6orf223Q8N319 242 aa13.01□□□□□ -0.33
UBXN1-215ENST00000533476 A0A1B0GX51 115 aa13□□□□□ -0.33
UBXN1-215ENST00000533476 C10orf25Q5T742 122 aa13□□□□□ -0.33
UBXN1-215ENST00000533476 UNQ6190/PRO20217Q6UXQ8 127 aa13□□□□□ -0.33
UBXN1-215ENST00000533476 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
UBXN1-215ENST00000533476 WFDC10BQ8IUB3 73 aa13□□□□□ -0.33
UBXN1-215ENST00000533476 SMCR5Q8TEV8 140 aa13□□□□□ -0.33
UBXN1-215ENST00000533476 PRR3P79522 188 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 295.2 ms