RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
CMTM1-216ENST00000533078 IGLV4-3A0A075B6K6 122 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 SCO1O75880 301 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 RHEBQ15382 184 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 ORMDL3Q8N138 153 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 ALKBH7Q9BT30 221 aaPredicted RBP6.79□□□□□ -1.32
CMTM1-216ENST00000533078 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
CMTM1-216ENST00000533078 NPYP01303 97 aa6.78□□□□□ -1.32
CMTM1-216ENST00000533078 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
CMTM1-216ENST00000533078 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
CMTM1-216ENST00000533078 Q8IZM0 81 aa6.78□□□□□ -1.32
CMTM1-216ENST00000533078 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
CMTM1-216ENST00000533078 VCX2Q9H322 139 aa6.78□□□□□ -1.32
CMTM1-216ENST00000533078 SMCO4Q9NRQ5 59 aa6.78□□□□□ -1.32
CMTM1-216ENST00000533078 F8VRH5 84 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 UBE2AP49459 152 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
CMTM1-216ENST00000533078 SEC11AP67812 179 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-216ENST00000533078 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 RETNLBQ9BQ08 111 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 NAT8Q9UHE5 227 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 CYSLTR1Q9Y271 337 aa6.77□□□□□ -1.33
CMTM1-216ENST00000533078 IGKV2D-26A0A0A0MRZ7 120 aa6.76□□□□□ -1.33
CMTM1-216ENST00000533078 CXCL5P42830 114 aa6.76□□□□□ -1.33
CMTM1-216ENST00000533078 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
CMTM1-216ENST00000533078 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
CMTM1-216ENST00000533078 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 HERVK_113P63121 156 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
CMTM1-216ENST00000533078 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CMTM1-216ENST00000533078 LOC389332A0A1B0GUA5 103 aa6.74□□□□□ -1.33
CMTM1-216ENST00000533078 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
CMTM1-216ENST00000533078 NPSP0C0P6 89 aa6.74□□□□□ -1.33
CMTM1-216ENST00000533078 CTAG1AP78358 180 aa6.74□□□□□ -1.33
CMTM1-216ENST00000533078 LAMTOR2Q9Y2Q5 125 aa6.74□□□□□ -1.33
CMTM1-216ENST00000533078 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 MT-ND4LP03901 98 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 ORMDL2Q53FV1 153 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 ATP5L2Q7Z4Y8 100 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
CMTM1-216ENST00000533078 A0A1B0GXF2 115 aa6.72□□□□□ -1.33
CMTM1-216ENST00000533078 COLCA2A8K830 154 aa6.72□□□□□ -1.33
CMTM1-216ENST00000533078 G0S2P27469 103 aa6.72□□□□□ -1.33
CMTM1-216ENST00000533078 AMELXQ99217 191 aa6.72□□□□□ -1.33
CMTM1-216ENST00000533078 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
CMTM1-216ENST00000533078 LOC105371267A0A1B0GV96 52 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 K7EMI3 77 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 ZC2HC1BQ5TFG8 222 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 RPS10P5Q9NQ39 176 aa6.71□□□□□ -1.34
CMTM1-216ENST00000533078 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
CMTM1-216ENST00000533078 Q8N8P6 123 aa6.7□□□□□ -1.34
CMTM1-216ENST00000533078 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
CMTM1-216ENST00000533078 CDKN2A-AS1Q9UH64 79 aa6.7□□□□□ -1.34
CMTM1-216ENST00000533078 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
CMTM1-216ENST00000533078 LINC01547P58512 204 aaPredicted RBP6.69□□□□□ -1.34
CMTM1-216ENST00000533078 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
CMTM1-216ENST00000533078 YPEL4Q96NS1 127 aa6.69□□□□□ -1.34
CMTM1-216ENST00000533078 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CMTM1-216ENST00000533078 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CMTM1-216ENST00000533078 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
CMTM1-216ENST00000533078 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
CMTM1-216ENST00000533078 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 RAB5BP61020 215 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 PDZD11Q5EBL8 140 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
CMTM1-216ENST00000533078 NXT2Q9NPJ8 142 aaKnown RBP6.67□□□□□ -1.34
CMTM1-216ENST00000533078 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
CMTM1-216ENST00000533078 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
CMTM1-216ENST00000533078 ATP5LO75964 103 aa6.65□□□□□ -1.34
CMTM1-216ENST00000533078 PRLHP81277 87 aa6.65□□□□□ -1.34
CMTM1-216ENST00000533078 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
CMTM1-216ENST00000533078 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
CMTM1-216ENST00000533078 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
CMTM1-216ENST00000533078 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
CMTM1-216ENST00000533078 TRAV9-1A0A075B6T8 112 aa6.63□□□□□ -1.35
CMTM1-216ENST00000533078 H3BRM9 83 aa6.63□□□□□ -1.35
CMTM1-216ENST00000533078 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
CMTM1-216ENST00000533078 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
CMTM1-216ENST00000533078 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
CMTM1-216ENST00000533078 LINC01549A6NIU2 74 aa6.62□□□□□ -1.35
CMTM1-216ENST00000533078 S100PP25815 95 aa6.62□□□□□ -1.35
CMTM1-216ENST00000533078 ERASQ7Z444 233 aa6.62□□□□□ -1.35
CMTM1-216ENST00000533078 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
CMTM1-216ENST00000533078 PFN2P35080 140 aa6.61□□□□□ -1.35
CMTM1-216ENST00000533078 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
CMTM1-216ENST00000533078 MRPL18Q9H0U6 180 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms