RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
CDC27-209ENST00000532893 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
CDC27-209ENST00000532893 NAT8BQ9UHF3 227 aa8.29□□□□□ -1.08
CDC27-209ENST00000532893 GAGE10A6NGK3 116 aa8.28□□□□□ -1.08
CDC27-209ENST00000532893 UBE2AP49459 152 aa8.28□□□□□ -1.08
CDC27-209ENST00000532893 ZC2HC1BQ5TFG8 222 aa8.28□□□□□ -1.08
CDC27-209ENST00000532893 PYGO1Q9Y3Y4 419 aa8.28□□□□□ -1.08
CDC27-209ENST00000532893 RAB5AP20339 215 aa8.27□□□□□ -1.09
CDC27-209ENST00000532893 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
CDC27-209ENST00000532893 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
CDC27-209ENST00000532893 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
CDC27-209ENST00000532893 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
CDC27-209ENST00000532893 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
CDC27-209ENST00000532893 EIF5A2Q9GZV4 153 aaKnown RBP8.27□□□□□ -1.09
CDC27-209ENST00000532893 BLOC1S1P78537 153 aa8.26□□□□□ -1.09
CDC27-209ENST00000532893 Q8IZM0 81 aa8.26□□□□□ -1.09
CDC27-209ENST00000532893 CTAG1AP78358 180 aa8.25□□□□□ -1.09
CDC27-209ENST00000532893 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
CDC27-209ENST00000532893 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
CDC27-209ENST00000532893 C2orf88Q9BSF0 95 aa8.24□□□□□ -1.09
CDC27-209ENST00000532893 A0A1B0GW15 77 aa8.23□□□□□ -1.09
CDC27-209ENST00000532893 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
CDC27-209ENST00000532893 F8VRH5 84 aa8.23□□□□□ -1.09
CDC27-209ENST00000532893 SRSF3P84103 164 aaKnown RBP8.23□□□□□ -1.09
CDC27-209ENST00000532893 ASB16-AS1Q495Z4 193 aa8.23□□□□□ -1.09
CDC27-209ENST00000532893 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
CDC27-209ENST00000532893 F8W036 122 aa8.22□□□□□ -1.09
CDC27-209ENST00000532893 PPBPP02775 128 aa8.22□□□□□ -1.09
CDC27-209ENST00000532893 SRP19P09132 144 aaKnown RBP8.22□□□□□ -1.09
CDC27-209ENST00000532893 PNRC1Q12796 327 aaPredicted RBP8.22□□□□□ -1.09
CDC27-209ENST00000532893 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
CDC27-209ENST00000532893 VCX2Q9H322 139 aa8.22□□□□□ -1.09
CDC27-209ENST00000532893 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
CDC27-209ENST00000532893 AMELXQ99217 191 aa8.21□□□□□ -1.1
CDC27-209ENST00000532893 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
CDC27-209ENST00000532893 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
CDC27-209ENST00000532893 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
CDC27-209ENST00000532893 PRELID3AQ96N28 172 aa8.2□□□□□ -1.1
CDC27-209ENST00000532893 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
CDC27-209ENST00000532893 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 SCO1O75880 301 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 S100A8P05109 93 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 PRLHP81277 87 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 ADIRFQ15847 76 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 FP248Q71RG6 208 aaPredicted RBP8.19□□□□□ -1.1
CDC27-209ENST00000532893 ORMDL3Q8N138 153 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 NKAPP1Q8N9T2 125 aa8.19□□□□□ -1.1
CDC27-209ENST00000532893 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
CDC27-209ENST00000532893 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
CDC27-209ENST00000532893 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
CDC27-209ENST00000532893 CYSLTR1Q9Y271 337 aa8.18□□□□□ -1.1
CDC27-209ENST00000532893 A0A1B0GXF2 115 aa8.17□□□□□ -1.1
CDC27-209ENST00000532893 CXCL5P42830 114 aa8.17□□□□□ -1.1
CDC27-209ENST00000532893 RAB5BP61020 215 aa8.17□□□□□ -1.1
CDC27-209ENST00000532893 FAM19A1Q7Z5A9 133 aa8.17□□□□□ -1.1
CDC27-209ENST00000532893 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
CDC27-209ENST00000532893 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
CDC27-209ENST00000532893 HERVK_113P63121 156 aa8.16□□□□□ -1.1
CDC27-209ENST00000532893 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
CDC27-209ENST00000532893 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
CDC27-209ENST00000532893 GEMIN7Q9H840 131 aaKnown RBP8.16□□□□□ -1.1
CDC27-209ENST00000532893 IGIPA6NJ69 53 aa8.15□□□□□ -1.1
CDC27-209ENST00000532893 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
CDC27-209ENST00000532893 SEC11AP67812 179 aa8.15□□□□□ -1.1
CDC27-209ENST00000532893 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 NPSP0C0P6 89 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 TMEM126AQ9H061 195 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 MAP1LC3AQ9H492 121 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
CDC27-209ENST00000532893 SMIM1B2RUZ4 78 aa8.12□□□□□ -1.11
CDC27-209ENST00000532893 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
CDC27-209ENST00000532893 Q8N8P6 123 aa8.12□□□□□ -1.11
CDC27-209ENST00000532893 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
CDC27-209ENST00000532893 C9JQL5 133 aa8.1□□□□□ -1.11
CDC27-209ENST00000532893 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
CDC27-209ENST00000532893 PAPPA-AS1Q5QFB9 102 aa8.1□□□□□ -1.11
CDC27-209ENST00000532893 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
CDC27-209ENST00000532893 M0R378 163 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 DAND5Q8N907 189 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 HIGD2AQ9BW72 106 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 KRTAP9-9Q9BYP9 154 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 KRTAP9-4Q9BYQ2 154 aa8.09□□□□□ -1.11
CDC27-209ENST00000532893 ATP5L2Q7Z4Y8 100 aa8.08□□□□□ -1.12
CDC27-209ENST00000532893 VPREB1P12018 145 aa8.07□□□□□ -1.12
CDC27-209ENST00000532893 PFN2P35080 140 aa8.07□□□□□ -1.12
CDC27-209ENST00000532893 Q8NBF4 154 aa8.07□□□□□ -1.12
CDC27-209ENST00000532893 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
CDC27-209ENST00000532893 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
CDC27-209ENST00000532893 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
CDC27-209ENST00000532893 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
CDC27-209ENST00000532893 K7EMI3 77 aa8.05□□□□□ -1.12
CDC27-209ENST00000532893 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
CDC27-209ENST00000532893 ATP5LO75964 103 aa8.04□□□□□ -1.12
CDC27-209ENST00000532893 SPINK1P00995 79 aa8.04□□□□□ -1.12
CDC27-209ENST00000532893 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
CDC27-209ENST00000532893 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms