RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TSTD3H0UI37 97 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 HLA-DQA1P01909 254 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 ESDP10768 282 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 ZNF25P17030 456 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 PMVKQ15126 192 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 LINC00173Q6ZV60 143 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 ORMDL3Q8N138 153 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 IMMP2LQ96T52 175 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 SIGMAR1Q99720 223 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 DHRS4-AS1Q9P1J3 65 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGKV3OR2-268A0A0C4DH90 116 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 C7orf77A4D0Y5 90 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 PHOX2AO14813 284 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 NPYP01303 97 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 DDTP30046 118 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 KRTAP10-1P60331 282 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 TMEM136Q6ZRR5 245 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 OR5A1Q8NGJ0 315 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 SMIM2Q9BVW6 85 aa3.78□□□□□ -1.8
HMGB1P42-201ENST00000532126 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 DNAH11Q96DT5 4516 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 TRAV9-1A0A075B6T8 112 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 SERF1AO75920 110 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 SLPIP03973 132 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 RHEBQ15382 184 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 C10orf91Q5T1B1 145 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 KRTAP26-1Q6PEX3 210 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 SCGB1D4Q6XE38 83 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 PRELID3AQ96N28 172 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 LAMTOR2Q9Y2Q5 125 aa3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 CARHSP1Q9Y2V2 147 aaKnown RBP3.77□□□□□ -1.81
HMGB1P42-201ENST00000532126 HERC2O95714 4834 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 SCGB1A1P11684 91 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 CXCL6P80162 114 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 ZNF664Q8N3J9 261 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 UBE2D4Q9Y2X8 147 aa3.76□□□□□ -1.81
HMGB1P42-201ENST00000532126 RYR1P21817 5038 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 LOC389332A0A1B0GUA5 103 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 LINC00959A0A1B0GUT2 108 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 APOC3P02656 99 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 XCL1P47992 114 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 SS18Q15532 418 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 C6orf99Q4VX62 202 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 SVBPQ8N300 66 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 TIMM21Q9BVV7 248 aa3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
HMGB1P42-201ENST00000532126 A0A087X002 238 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 CCL25O15444 150 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 RPL39P62891 51 aaKnown RBP3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 ORMDL2Q53FV1 153 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 RNASE13Q5GAN3 156 aaKnown RBP3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 Q8N8P6 123 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 GNB1LQ9BYB4 327 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 SPANXA1Q9NS26 97 aa3.74□□□□□ -1.81
HMGB1P42-201ENST00000532126 PCLOQ9Y6V0 5065 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 TRAV13-1A0A0B4J241 112 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 K7EMI3 77 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 MT-ND6P03923 174 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 HAMPP81172 84 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 Q6ZUT4 128 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 OR13C6PQ8NH95 151 aa3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 NXT2Q9NPJ8 142 aaKnown RBP3.73□□□□□ -1.81
HMGB1P42-201ENST00000532126 LRP1BQ9NZR2 4599 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 GVQW2A0A096LPI5 108 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 IGHV1-58A0A0C4DH39 117 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 A0A0J9YXY3 114 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 IFITM10A6NMD0 228 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 M0R143 59 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 COX7A2LO14548 114 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 S100A2P29034 98 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 MRPS36P82909 103 aaKnown RBP3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 FABP9Q0Z7S8 132 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 HIGD2BQ4VC39 106 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 Q6ZSA8 131 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 C15orf56Q8N910 161 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 C9orf163Q8N9P6 203 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 C7orf33Q8WU49 177 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 CYSLTR1Q9Y271 337 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 DNAH5Q8TE73 4624 aa3.72□□□□□ -1.81
HMGB1P42-201ENST00000532126 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 C8orf87E5RJ46 101 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 ORAOV1Q8WV07 137 aa3.71□□□□□ -1.82
HMGB1P42-201ENST00000532126 FAM104AQ969W3 186 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms