RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 CSMD2Q7Z408 3487 aa-1.32□□□□□ -2.62
ATM-217ENST00000531957 KIAA1551Q9HCM1 1747 aa-1.32□□□□□ -2.62
ATM-217ENST00000531957 CLIP1P30622 1438 aa-1.32□□□□□ -2.62
ATM-217ENST00000531957 PPIP5K1Q6PFW1 1433 aa-1.32□□□□□ -2.62
ATM-217ENST00000531957 TMEM2Q9UHN6 1383 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 ZFHX4Q86UP3 3567 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 BTAF1O14981 1849 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 DOCK2Q92608 1830 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 PRLHP81277 87 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 MIC13Q5XKP0 118 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 AQP10Q96PS8 301 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 COPZ2Q9P299 210 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 XRN1Q8IZH2 1706 aaKnown RBP-1.33□□□□□ -2.62
ATM-217ENST00000531957 C1orf167Q5SNV9 1468 aa-1.33□□□□□ -2.62
ATM-217ENST00000531957 SMG6Q86US8 1419 aaKnown RBP-1.33□□□□□ -2.62
ATM-217ENST00000531957 PRUNE2Q8WUY3 3088 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 MYOM1P52179 1685 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 TRAV36DV7A0A075B6V5 113 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 TRAV13-2A0A0B4J235 113 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 LOC100130705A0A1B0GUX0 176 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 LOC285095A0A1B0GVY8 99 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 HMGN4O00479 90 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 NDUFB6O95139 128 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 TNFSF15O95150 251 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 SCTP09683 121 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 IGLC1P0CG04 106 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 RRAS2P62070 204 aaPredicted RBP-1.34□□□□□ -2.62
ATM-217ENST00000531957 TFAMQ00059 246 aaKnown RBP-1.34□□□□□ -2.62
ATM-217ENST00000531957 WHAMMP3Q1A5X7 153 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 CLPSL2Q6UWE3 100 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 C5orf38Q86SI9 138 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 TTC9CQ8N5M4 171 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 MGST2Q99735 147 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 DYNLRB1Q9NP97 96 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 V9GYQ6 96 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 MYH13Q9UKX3 1938 aa-1.34□□□□□ -2.62
ATM-217ENST00000531957 TET3O43151 1660 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 ZNF518AQ6AHZ1 1483 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 PLEKHH2Q8IVE3 1493 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 NLRP1Q9C000 1473 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 IL5P05113 134 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 NCS1P62166 190 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 UBA52P62987 128 aaKnown RBP-1.35□□□□□ -2.63
ATM-217ENST00000531957 MRPL54Q6P161 138 aaKnown RBP-1.35□□□□□ -2.63
ATM-217ENST00000531957 CTAGE3PQ8IX95 158 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 LCN9Q8WX39 176 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 SEC11CQ9BY50 192 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 PRO1933Q9H354 126 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 HIGD1AQ9Y241 93 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 EDC4Q6P2E9 1401 aaKnown RBP-1.35□□□□□ -2.63
ATM-217ENST00000531957 MYH7P12883 1935 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 LRRC37AA6NMS7 1700 aa-1.35□□□□□ -2.63
ATM-217ENST00000531957 TLN1Q9Y490 2541 aaKnown RBP-1.35□□□□□ -2.63
ATM-217ENST00000531957 NEFHP12036 1026 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 HIST1H1DP16402 221 aaKnown RBP-1.36□□□□□ -2.63
ATM-217ENST00000531957 SEC11AP67812 179 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 COX6B2Q6YFQ2 88 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 FDCSPQ8NFU4 85 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 MYOZ3Q8TDC0 251 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 SPTSSAQ969W0 71 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 CENPHQ9H3R5 247 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 TPT1P8Q9HAU6 139 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 NXT2Q9NPJ8 142 aaKnown RBP-1.36□□□□□ -2.63
ATM-217ENST00000531957 LINC00846Q9NV44 126 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 MYH6P13533 1939 aa-1.36□□□□□ -2.63
ATM-217ENST00000531957 MBD5Q9P267 1494 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 ARAP2Q8WZ64 1704 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 ARHGEF5Q12774 1597 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 CDC42BPGQ6DT37 1551 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 A0A1B0GU69 56 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 S100A7L2Q5SY68 101 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 TAC4Q86UU9 113 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 FAIMQ9NVQ4 179 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 SPANXCQ9NY87 97 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 SMPXQ9UHP9 88 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 ANKRD30AQ9BXX3 1397 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 ALKQ9UM73 1620 aa-1.37□□□□□ -2.63
ATM-217ENST00000531957 MAPKBP1O60336 1514 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 A0A1B0GX51 115 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 TSTD3H0UI37 97 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 SNCGO76070 127 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 FABP1P07148 127 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 NMSQ5H8A3 153 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 CDC42BPAQ5VT25 1732 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 PSME4Q14997 1843 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 CFAP54Q96N23 3096 aa-1.38□□□□□ -2.63
ATM-217ENST00000531957 PIGBOS1A0A0B4J2F0 54 aa-1.39□□□□□ -2.63
ATM-217ENST00000531957 HIST1H1AQ02539 215 aaPredicted RBP-1.39□□□□□ -2.63
ATM-217ENST00000531957 HSPB11Q9Y547 144 aa-1.39□□□□□ -2.63
ATM-217ENST00000531957 ADGRL2O95490 1459 aa-1.39□□□□□ -2.63
ATM-217ENST00000531957 MRC2Q9UBG0 1479 aa-1.39□□□□□ -2.63
ATM-217ENST00000531957 SYNJ1O43426 1573 aa-1.39□□□□□ -2.63
ATM-217ENST00000531957 SPTAN1Q13813 2472 aaKnown RBP-1.4□□□□□ -2.63
ATM-217ENST00000531957 SPTY2D1-AS1A0A0U1RR47 76 aa-1.4□□□□□ -2.63
ATM-217ENST00000531957 FAM236AA0A1B0GUQ0 79 aa-1.4□□□□□ -2.63
ATM-217ENST00000531957 FAM236BA0A1B0GV22 79 aa-1.4□□□□□ -2.63
ATM-217ENST00000531957 SAA2P0DJI9 122 aaPredicted RBP-1.4□□□□□ -2.63
ATM-217ENST00000531957 SNCAP37840 140 aa-1.4□□□□□ -2.63
ATM-217ENST00000531957 C9orf153Q5TBE3 101 aa-1.4□□□□□ -2.63
ATM-217ENST00000531957 FAM223AQ8IWN6 122 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms