RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 HIGD1BQ9P298 99 aa11□□□□□ -0.65
PKP3-208ENST00000531857 CSDC2Q9Y534 153 aaKnown RBP11□□□□□ -0.65
PKP3-208ENST00000531857 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
PKP3-208ENST00000531857 SLPIP03973 132 aa10.99□□□□□ -0.65
PKP3-208ENST00000531857 CNBPP62633 177 aaKnown RBP10.99□□□□□ -0.65
PKP3-208ENST00000531857 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
PKP3-208ENST00000531857 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
PKP3-208ENST00000531857 SNHG12Q9BXW3 62 aa10.99□□□□□ -0.65
PKP3-208ENST00000531857 A0A087WYN8 130 aa10.98□□□□□ -0.65
PKP3-208ENST00000531857 STPG4Q8N801 248 aa10.98□□□□□ -0.65
PKP3-208ENST00000531857 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
PKP3-208ENST00000531857 LRP2P98164 4655 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 TRBV25-1A0A075B6N4 114 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 E9PLD3 99 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 RPL39P62891 51 aaKnown RBP10.97□□□□□ -0.65
PKP3-208ENST00000531857 SEC11AP67812 179 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 REG3AQ06141 175 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 AMELXQ99217 191 aa10.97□□□□□ -0.65
PKP3-208ENST00000531857 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.65
PKP3-208ENST00000531857 FGF6P10767 208 aa10.96□□□□□ -0.65
PKP3-208ENST00000531857 NMUP48645 174 aa10.96□□□□□ -0.65
PKP3-208ENST00000531857 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
PKP3-208ENST00000531857 TNXBP22105 4242 aa10.96□□□□□ -0.66
PKP3-208ENST00000531857 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
PKP3-208ENST00000531857 TAL2Q16559 108 aa10.95□□□□□ -0.66
PKP3-208ENST00000531857 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
PKP3-208ENST00000531857 HSD52Q0P140 79 aa10.94□□□□□ -0.66
PKP3-208ENST00000531857 UBE2D4Q9Y2X8 147 aa10.94□□□□□ -0.66
PKP3-208ENST00000531857 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
PKP3-208ENST00000531857 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
PKP3-208ENST00000531857 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
PKP3-208ENST00000531857 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
PKP3-208ENST00000531857 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
PKP3-208ENST00000531857 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
PKP3-208ENST00000531857 TINCRA0A1B0GVN0 87 aa10.91□□□□□ -0.66
PKP3-208ENST00000531857 UBE2L6O14933 153 aa10.91□□□□□ -0.66
PKP3-208ENST00000531857 PLEKHB2Q96CS7 222 aa10.91□□□□□ -0.66
PKP3-208ENST00000531857 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
PKP3-208ENST00000531857 A6NDN8 102 aa10.9□□□□□ -0.66
PKP3-208ENST00000531857 C2orf91Q6ZV80 131 aa10.9□□□□□ -0.66
PKP3-208ENST00000531857 FAM19A3Q7Z5A8 133 aa10.9□□□□□ -0.66
PKP3-208ENST00000531857 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
PKP3-208ENST00000531857 MYMXA0A1B0GTQ4 84 aa10.89□□□□□ -0.67
PKP3-208ENST00000531857 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
PKP3-208ENST00000531857 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
PKP3-208ENST00000531857 H3BRM9 83 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 HINT1P49773 126 aaPredicted RBP10.88□□□□□ -0.67
PKP3-208ENST00000531857 COX6A2Q02221 97 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 BVES-AS1Q5T3Y7 98 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 AMMECR1LQ6DCA0 310 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 PCP2Q8IVA1 136 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 C7orf33Q8WU49 177 aa10.88□□□□□ -0.67
PKP3-208ENST00000531857 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
PKP3-208ENST00000531857 LEPROTO15243 131 aa10.87□□□□□ -0.67
PKP3-208ENST00000531857 HERVK_113P63121 156 aa10.87□□□□□ -0.67
PKP3-208ENST00000531857 BATFQ16520 125 aa10.87□□□□□ -0.67
PKP3-208ENST00000531857 TMEM223A0PJW6 202 aa10.86□□□□□ -0.67
PKP3-208ENST00000531857 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
PKP3-208ENST00000531857 ORAOV1Q8WV07 137 aa10.86□□□□□ -0.67
PKP3-208ENST00000531857 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
PKP3-208ENST00000531857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.85□□□□□ -0.67
PKP3-208ENST00000531857 IGKV2-29A2NJV5 120 aaPredicted RBP10.85□□□□□ -0.67
PKP3-208ENST00000531857 CCL25O15444 150 aa10.85□□□□□ -0.67
PKP3-208ENST00000531857 LGALS3P17931 250 aaKnown RBP10.85□□□□□ -0.67
PKP3-208ENST00000531857 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
PKP3-208ENST00000531857 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
PKP3-208ENST00000531857 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
PKP3-208ENST00000531857 UBE2D1P51668 147 aa10.84□□□□□ -0.67
PKP3-208ENST00000531857 HIGD2BQ4VC39 106 aa10.84□□□□□ -0.67
PKP3-208ENST00000531857 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
PKP3-208ENST00000531857 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
PKP3-208ENST00000531857 ZNF815PA8K554 130 aa10.83□□□□□ -0.68
PKP3-208ENST00000531857 J3QQQ9 107 aa10.83□□□□□ -0.68
PKP3-208ENST00000531857 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
PKP3-208ENST00000531857 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
PKP3-208ENST00000531857 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
PKP3-208ENST00000531857 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
PKP3-208ENST00000531857 IGHV1-58A0A0C4DH39 117 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 A6NJY4 79 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 CFAP161Q6P656 301 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 Q6ZUT4 128 aa10.81□□□□□ -0.68
PKP3-208ENST00000531857 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
PKP3-208ENST00000531857 A0A1B0GV90 55 aa10.8□□□□□ -0.68
PKP3-208ENST00000531857 CEND1Q8N111 149 aa10.8□□□□□ -0.68
PKP3-208ENST00000531857 A0A096LNI7 61 aa10.79□□□□□ -0.68
PKP3-208ENST00000531857 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
PKP3-208ENST00000531857 Q6ZVH6 145 aa10.78□□□□□ -0.68
PKP3-208ENST00000531857 LINC00469Q8N7U9 141 aa10.78□□□□□ -0.68
PKP3-208ENST00000531857 TP73-AS1Q9UF72 201 aa10.78□□□□□ -0.68
PKP3-208ENST00000531857 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
PKP3-208ENST00000531857 SMIM13P0DJ93 91 aa10.77□□□□□ -0.69
PKP3-208ENST00000531857 PTTG1IPP53801 180 aa10.77□□□□□ -0.69
PKP3-208ENST00000531857 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
PKP3-208ENST00000531857 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms