RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
LINC01016-204ENST00000531046 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
LINC01016-204ENST00000531046 PRSS2P07478 247 aa8.13□□□□□ -1.11
LINC01016-204ENST00000531046 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
LINC01016-204ENST00000531046 NDUFA6P56556 154 aa8.12□□□□□ -1.11
LINC01016-204ENST00000531046 PMVKQ15126 192 aa8.12□□□□□ -1.11
LINC01016-204ENST00000531046 Q6ZRP5 223 aa8.12□□□□□ -1.11
LINC01016-204ENST00000531046 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
LINC01016-204ENST00000531046 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
LINC01016-204ENST00000531046 HBDP02042 147 aa8.11□□□□□ -1.11
LINC01016-204ENST00000531046 RAB5BP61020 215 aa8.11□□□□□ -1.11
LINC01016-204ENST00000531046 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
LINC01016-204ENST00000531046 C6orf226Q5I0X4 101 aa8.11□□□□□ -1.11
LINC01016-204ENST00000531046 J3QL48 77 aa8.1□□□□□ -1.11
LINC01016-204ENST00000531046 CKS1BP61024 79 aa8.1□□□□□ -1.11
LINC01016-204ENST00000531046 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
LINC01016-204ENST00000531046 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
LINC01016-204ENST00000531046 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
LINC01016-204ENST00000531046 SMIM1B2RUZ4 78 aa8.09□□□□□ -1.11
LINC01016-204ENST00000531046 TLX1NBP0CAT3 122 aa8.09□□□□□ -1.11
LINC01016-204ENST00000531046 Q8IZM0 81 aa8.09□□□□□ -1.11
LINC01016-204ENST00000531046 FAM168BA1KXE4 195 aa8.08□□□□□ -1.12
LINC01016-204ENST00000531046 KRTAP29-1A8MX34 341 aaPredicted RBP8.08□□□□□ -1.12
LINC01016-204ENST00000531046 TRGC2P03986 189 aa8.08□□□□□ -1.12
LINC01016-204ENST00000531046 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
LINC01016-204ENST00000531046 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
LINC01016-204ENST00000531046 PDZD11Q5EBL8 140 aa8.08□□□□□ -1.12
LINC01016-204ENST00000531046 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
LINC01016-204ENST00000531046 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
LINC01016-204ENST00000531046 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
LINC01016-204ENST00000531046 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
LINC01016-204ENST00000531046 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
LINC01016-204ENST00000531046 CHCHD1Q96BP2 118 aaKnown RBP8.06□□□□□ -1.12
LINC01016-204ENST00000531046 F8VRH5 84 aa8.05□□□□□ -1.12
LINC01016-204ENST00000531046 ATP5LO75964 103 aa8.05□□□□□ -1.12
LINC01016-204ENST00000531046 IGLC3P0DOY3 106 aa8.05□□□□□ -1.12
LINC01016-204ENST00000531046 BAGE3Q86Y29 109 aa8.05□□□□□ -1.12
LINC01016-204ENST00000531046 H3BRM9 83 aa8.04□□□□□ -1.12
LINC01016-204ENST00000531046 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
LINC01016-204ENST00000531046 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 COLCA2A8K830 154 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 OXTP01178 125 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
LINC01016-204ENST00000531046 CXCL5P42830 114 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
LINC01016-204ENST00000531046 HSBP1O75506 76 aa8.02□□□□□ -1.13
LINC01016-204ENST00000531046 SCO1O75880 301 aa8.02□□□□□ -1.13
LINC01016-204ENST00000531046 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
LINC01016-204ENST00000531046 PSORS1C2Q9UIG4 136 aa8.02□□□□□ -1.13
LINC01016-204ENST00000531046 M0QXV9 152 aa8.01□□□□□ -1.13
LINC01016-204ENST00000531046 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
LINC01016-204ENST00000531046 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
LINC01016-204ENST00000531046 CHTOPQ9Y3Y2 248 aaKnown RBP8.01□□□□□ -1.13
LINC01016-204ENST00000531046 IGLV5-39A0A0G2JS06 123 aa8□□□□□ -1.13
LINC01016-204ENST00000531046 SERF1AO75920 110 aa8□□□□□ -1.13
LINC01016-204ENST00000531046 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
LINC01016-204ENST00000531046 TNXBP22105 4242 aa7.99□□□□□ -1.13
LINC01016-204ENST00000531046 LINC00310P59036 64 aa7.99□□□□□ -1.13
LINC01016-204ENST00000531046 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
LINC01016-204ENST00000531046 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
LINC01016-204ENST00000531046 H0Y8G0 127 aa7.98□□□□□ -1.13
LINC01016-204ENST00000531046 NUPR1O60356 82 aa7.98□□□□□ -1.13
LINC01016-204ENST00000531046 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
LINC01016-204ENST00000531046 TRAV12-1A0A0B4J245 112 aa7.97□□□□□ -1.13
LINC01016-204ENST00000531046 UBE2BP63146 152 aa7.97□□□□□ -1.13
LINC01016-204ENST00000531046 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC01016-204ENST00000531046 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
LINC01016-204ENST00000531046 PFN2P35080 140 aa7.96□□□□□ -1.14
LINC01016-204ENST00000531046 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
LINC01016-204ENST00000531046 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
LINC01016-204ENST00000531046 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
LINC01016-204ENST00000531046 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
LINC01016-204ENST00000531046 FABP4P15090 132 aa7.95□□□□□ -1.14
LINC01016-204ENST00000531046 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
LINC01016-204ENST00000531046 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
LINC01016-204ENST00000531046 ODF1Q14990 250 aa7.93□□□□□ -1.14
LINC01016-204ENST00000531046 REG3GQ6UW15 175 aa7.92□□□□□ -1.14
LINC01016-204ENST00000531046 ERG28Q9UKR5 140 aa7.92□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 LBHQ53QV2 105 aaPredicted RBP7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
LINC01016-204ENST00000531046 MRPL55Q7Z7F7 128 aaKnown RBP7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 HSPB8Q9UJY1 196 aa7.91□□□□□ -1.14
LINC01016-204ENST00000531046 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
LINC01016-204ENST00000531046 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.14
LINC01016-204ENST00000531046 SND1-IT1Q9HBX3 110 aa7.9□□□□□ -1.14
LINC01016-204ENST00000531046 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
LINC01016-204ENST00000531046 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
LINC01016-204ENST00000531046 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms