RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 C12orf57Q99622 126 aa3.21□□□□□ -1.9
SSBP3-213ENST00000530618 A0A087WZ39 114 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 hDV102S1A0JD36 115 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 SCGB1D1O95968 90 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 SPAG11BQ08648 103 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 CDPF1Q6NVV7 123 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 FAM19A3Q7Z5A8 133 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 NTN5Q8WTR8 489 aaPredicted RBP3.2□□□□□ -1.9
SSBP3-213ENST00000530618 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 HIST1H2BLQ99880 126 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 KRTAP1-5Q9BYS1 174 aa3.2□□□□□ -1.9
SSBP3-213ENST00000530618 IGHV3OR16-9A0A0B4J2B5 98 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 A0A0J9YXV3 536 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 C11orf86A6NJI1 115 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 NDUFA1O15239 70 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 CDK2AP2O75956 126 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 C3orf79P0CE67 100 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 LGALS3P17931 250 aaKnown RBP3.19□□□□□ -1.9
SSBP3-213ENST00000530618 NMUP48645 174 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 LINC00310P59036 64 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 FOXI1Q12951 378 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 ODF1Q14990 250 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 LINC01545Q5VT33 79 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 C5orf38Q86SI9 138 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 Q8IZM0 81 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 ORAOV1Q8WV07 137 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 CAMK2N2Q96S95 79 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
SSBP3-213ENST00000530618 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
SSBP3-213ENST00000530618 TOMM7Q9P0U1 55 aa3.19□□□□□ -1.9
SSBP3-213ENST00000530618 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 IGHV3-64A0A075B6Q5 118 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 IGLV5-45A0A087WSX0 123 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 GVQW2A0A096LPI5 108 aaPredicted RBP3.18□□□□□ -1.9
SSBP3-213ENST00000530618 MYMXA0A1B0GTQ4 84 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 NUPR1O60356 82 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 ZNF22P17026 224 aaPredicted RBP3.18□□□□□ -1.9
SSBP3-213ENST00000530618 HERV-K104P63124 156 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 CIRBPQ14011 172 aaKnown RBP3.18□□□□□ -1.9
SSBP3-213ENST00000530618 ZC2HC1BQ5TFG8 222 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 LINC00173Q6ZV60 143 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 Q8N814 137 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 C2orf48Q96LS8 159 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 CARD19Q96LW7 228 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 PGPEP1Q9NXJ5 209 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 LINC00474Q9P2X8 69 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 CDKN2A-AS1Q9UH64 79 aa3.18□□□□□ -1.9
SSBP3-213ENST00000530618 A0A087WTM6 91 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 IGLV5-52A0A0A0MRZ9 124 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 SPINK8P0C7L1 97 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 KRTAP10-2P60368 255 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 SYCNQ0VAF6 134 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 Q8N1X5 172 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 COX7B2Q8TF08 81 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 VAMP8Q9BV40 100 aa3.17□□□□□ -1.9
SSBP3-213ENST00000530618 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 SMIM1B2RUZ4 78 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 E9PLD3 99 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 LECT2O14960 151 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 LEPROTO15243 131 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 CNBPP62633 177 aaKnown RBP3.16□□□□□ -1.9
SSBP3-213ENST00000530618 COX17Q14061 63 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 RNF151Q2KHN1 245 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 MEIG1Q5JSS6 88 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 SCGB1D4Q6XE38 83 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
SSBP3-213ENST00000530618 PMCHL2Q9BQD1 86 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 MIEN1Q9BRT3 115 aa3.16□□□□□ -1.9
SSBP3-213ENST00000530618 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.15□□□□□ -1.91
SSBP3-213ENST00000530618 LOC107984640A0A0U1RRK4 108 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 C16orf90A8MZG2 172 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 J3QQQ9 107 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 COX6A2Q02221 97 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 JOSD1Q15040 202 aaPredicted RBP3.15□□□□□ -1.91
SSBP3-213ENST00000530618 MAPKAPK5-AS1Q8N8E1 139 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 DPH3Q96FX2 82 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 NDUFA12Q9UI09 145 aa3.15□□□□□ -1.91
SSBP3-213ENST00000530618 IGLV5-39A0A0G2JS06 123 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 LRCOL1A6NCL2 159 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 ZNF815PA8K554 130 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 TMEM238C9JI98 176 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 XGP55808 180 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 RPL18AQ02543 176 aaKnown RBP3.14□□□□□ -1.91
SSBP3-213ENST00000530618 LBHQ53QV2 105 aaPredicted RBP3.14□□□□□ -1.91
SSBP3-213ENST00000530618 KRTAP26-1Q6PEX3 210 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 ATOH7Q8N100 152 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 FAM104AQ969W3 186 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 CBY1Q9Y3M2 126 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 LRP2P98164 4655 aa3.14□□□□□ -1.91
SSBP3-213ENST00000530618 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
SSBP3-213ENST00000530618 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
SSBP3-213ENST00000530618 LINC00158P58513 81 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms