RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 COMMD7Q86VX2 200 aa8.78□□□□□ -1
CAPN1-219ENST00000530495 ALKBH7Q9BT30 221 aaPredicted RBP8.78□□□□□ -1
CAPN1-219ENST00000530495 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
CAPN1-219ENST00000530495 TP73-AS1Q9UF72 201 aa8.78□□□□□ -1
CAPN1-219ENST00000530495 LAMTOR2Q9Y2Q5 125 aa8.78□□□□□ -1
CAPN1-219ENST00000530495 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 BCE1O60756 84 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 NPSP0C0P6 89 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 CRYGAP11844 174 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 C2orf66Q6UXQ4 117 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
CAPN1-219ENST00000530495 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 CYSLTR1Q9Y271 337 aa8.77□□□□□ -1.01
CAPN1-219ENST00000530495 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
CAPN1-219ENST00000530495 Q8N8P6 123 aa8.76□□□□□ -1.01
CAPN1-219ENST00000530495 MAP1LC3AQ9H492 121 aa8.76□□□□□ -1.01
CAPN1-219ENST00000530495 F8VRH5 84 aa8.75□□□□□ -1.01
CAPN1-219ENST00000530495 CDKN2A-AS1Q9UH64 79 aa8.74□□□□□ -1.01
CAPN1-219ENST00000530495 K7EMI3 77 aa8.73□□□□□ -1.01
CAPN1-219ENST00000530495 HERVK_113P63121 156 aa8.73□□□□□ -1.01
CAPN1-219ENST00000530495 SEC11AP67812 179 aa8.73□□□□□ -1.01
CAPN1-219ENST00000530495 ORMDL2Q53FV1 153 aa8.73□□□□□ -1.01
CAPN1-219ENST00000530495 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
CAPN1-219ENST00000530495 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
CAPN1-219ENST00000530495 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
CAPN1-219ENST00000530495 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
CAPN1-219ENST00000530495 ANAPC11Q9NYG5 84 aa8.71□□□□□ -1.02
CAPN1-219ENST00000530495 CXCL5P42830 114 aa8.7□□□□□ -1.02
CAPN1-219ENST00000530495 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
CAPN1-219ENST00000530495 SEC11CQ9BY50 192 aa8.7□□□□□ -1.02
CAPN1-219ENST00000530495 GEMIN7Q9H840 131 aaKnown RBP8.7□□□□□ -1.02
CAPN1-219ENST00000530495 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-219ENST00000530495 KRTAP13-1Q8IUC0 172 aa8.69□□□□□ -1.02
CAPN1-219ENST00000530495 G0S2P27469 103 aa8.68□□□□□ -1.02
CAPN1-219ENST00000530495 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
CAPN1-219ENST00000530495 C10orf91Q5T1B1 145 aa8.68□□□□□ -1.02
CAPN1-219ENST00000530495 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
CAPN1-219ENST00000530495 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
CAPN1-219ENST00000530495 ADCYAP1P18509 176 aa8.67□□□□□ -1.02
CAPN1-219ENST00000530495 SLC7A5P1Q8MH63 180 aa8.67□□□□□ -1.02
CAPN1-219ENST00000530495 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
CAPN1-219ENST00000530495 RETNLBQ9BQ08 111 aa8.67□□□□□ -1.02
CAPN1-219ENST00000530495 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
CAPN1-219ENST00000530495 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
CAPN1-219ENST00000530495 PDZD11Q5EBL8 140 aa8.66□□□□□ -1.02
CAPN1-219ENST00000530495 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
CAPN1-219ENST00000530495 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
CAPN1-219ENST00000530495 UBE2AP49459 152 aa8.65□□□□□ -1.02
CAPN1-219ENST00000530495 CTAG1AP78358 180 aa8.65□□□□□ -1.02
CAPN1-219ENST00000530495 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
CAPN1-219ENST00000530495 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
CAPN1-219ENST00000530495 CDIP1Q9H305 208 aa8.65□□□□□ -1.02
CAPN1-219ENST00000530495 FAT4Q6V0I7 4981 aa8.64□□□□□ -1.03
CAPN1-219ENST00000530495 ERASQ7Z444 233 aa8.64□□□□□ -1.03
CAPN1-219ENST00000530495 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
CAPN1-219ENST00000530495 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 RAB5BP61020 215 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 NKAPP1Q8N9T2 125 aa8.63□□□□□ -1.03
CAPN1-219ENST00000530495 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
CAPN1-219ENST00000530495 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
CAPN1-219ENST00000530495 SVBPQ8N300 66 aa8.62□□□□□ -1.03
CAPN1-219ENST00000530495 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
CAPN1-219ENST00000530495 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
CAPN1-219ENST00000530495 SNAPINO95295 136 aa8.6□□□□□ -1.03
CAPN1-219ENST00000530495 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
CAPN1-219ENST00000530495 APOC3P02656 99 aa8.6□□□□□ -1.03
CAPN1-219ENST00000530495 RHEBQ15382 184 aa8.6□□□□□ -1.03
CAPN1-219ENST00000530495 SCO1O75880 301 aa8.59□□□□□ -1.03
CAPN1-219ENST00000530495 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
CAPN1-219ENST00000530495 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
CAPN1-219ENST00000530495 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
CAPN1-219ENST00000530495 S100A1P23297 94 aa8.58□□□□□ -1.04
CAPN1-219ENST00000530495 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
CAPN1-219ENST00000530495 ATP5LO75964 103 aa8.57□□□□□ -1.04
CAPN1-219ENST00000530495 PRLHP81277 87 aa8.57□□□□□ -1.04
CAPN1-219ENST00000530495 KIAA1644Q3SXP7 199 aa8.57□□□□□ -1.04
CAPN1-219ENST00000530495 TMEM126AQ9H061 195 aa8.57□□□□□ -1.04
CAPN1-219ENST00000530495 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
CAPN1-219ENST00000530495 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
CAPN1-219ENST00000530495 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
CAPN1-219ENST00000530495 PPDPFQ9H3Y8 114 aa8.56□□□□□ -1.04
CAPN1-219ENST00000530495 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
CAPN1-219ENST00000530495 ATP6V1G1O75348 118 aa8.55□□□□□ -1.04
CAPN1-219ENST00000530495 VPREB1P12018 145 aa8.55□□□□□ -1.04
CAPN1-219ENST00000530495 PFN2P35080 140 aa8.55□□□□□ -1.04
CAPN1-219ENST00000530495 PMVKQ15126 192 aa8.55□□□□□ -1.04
CAPN1-219ENST00000530495 M0R378 163 aa8.54□□□□□ -1.04
CAPN1-219ENST00000530495 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
CAPN1-219ENST00000530495 RPS10P5Q9NQ39 176 aa8.54□□□□□ -1.04
CAPN1-219ENST00000530495 H3BRM9 83 aa8.53□□□□□ -1.04
CAPN1-219ENST00000530495 RPL24P83731 157 aaKnown RBP8.53□□□□□ -1.04
CAPN1-219ENST00000530495 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
CAPN1-219ENST00000530495 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
CAPN1-219ENST00000530495 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
CAPN1-219ENST00000530495 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
CAPN1-219ENST00000530495 COX17Q14061 63 aa8.52□□□□□ -1.05
CAPN1-219ENST00000530495 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms