RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LOC107984156A0A0G2JMH3 177 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 hADV29S1A0JD25 119 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 ZNF815PA8K554 130 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 H7BZZ5 65 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 NDUFC2O95298 119 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
CASP4-208ENST00000530309 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
CASP4-208ENST00000530309 ZNF56Q15929 161 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 C7orf65Q6ZTY9 151 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 ARL17AQ8IVW1 177 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 EXOC3-AS1Q8N2X6 119 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 SMIM2Q9BVW6 85 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 ENY2Q9NPA8 101 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 KIAA1549Q9HCM3 1950 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 TNRC6BQ9UPQ9 1833 aaKnown RBP1.86□□□□□ -2.11
CASP4-208ENST00000530309 ABCA1O95477 2261 aa1.86□□□□□ -2.11
CASP4-208ENST00000530309 NBEAQ8NFP9 2946 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.85□□□□□ -2.11
CASP4-208ENST00000530309 TRAV26-2A0A0B4J265 109 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 DEFB108AA8MXU0 73 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 IBA57-AS1B1ANH7 110 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 K7EIM0 57 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 M0R3E3 92 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 TIMM17BO60830 172 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 NDUFA3O95167 84 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 TRACP01848 142 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
CASP4-208ENST00000530309 Q6JHZ5 121 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 MUSTN1Q8IVN3 82 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 TMEM141Q96I45 108 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 DSCR8Q96T75 97 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 SERP1Q9Y6X1 66 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 CHD7Q9P2D1 2997 aa1.85□□□□□ -2.11
CASP4-208ENST00000530309 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
CASP4-208ENST00000530309 RANBP2P49792 3224 aaKnown RBP1.84□□□□□ -2.11
CASP4-208ENST00000530309 NAV3Q8IVL0 2385 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 TRAV13-1A0A0B4J241 112 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 TRBV10-3A0A0K0K1G6 114 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 I3L3M4 83 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 TFF1P04155 84 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 KLKP1Q107X0 134 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 Q8N2B8 174 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 SLC50A1Q9BRV3 221 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 SDK1Q7Z5N4 2213 aa1.84□□□□□ -2.11
CASP4-208ENST00000530309 FAM186AA6NE01 2351 aa1.84□□□□□ -2.12
CASP4-208ENST00000530309 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 TRBV27A0A0K0K1C4 114 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 MRPL33O75394 65 aaKnown RBP1.83□□□□□ -2.12
CASP4-208ENST00000530309 CRPP02741 224 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
CASP4-208ENST00000530309 RNASE4P34096 147 aaKnown RBP1.83□□□□□ -2.12
CASP4-208ENST00000530309 RHOHQ15669 191 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 C10orf55Q5SWW7 151 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 SFTA2Q6UW10 78 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 LENEPQ9Y5L5 61 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 U3KQA8 63 aa1.83□□□□□ -2.12
CASP4-208ENST00000530309 MYO7AQ13402 2215 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 ASXL3Q9C0F0 2248 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 CEP192Q8TEP8 1941 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
CASP4-208ENST00000530309 FAM223BA6NKX1 122 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 H3BVH4 76 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 PPP1R17O96001 155 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
CASP4-208ENST00000530309 PLGLAQ15195 96 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 GAFA1Q96PS6 74 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 TIMM8BQ9Y5J9 83 aaPredicted RBP1.82□□□□□ -2.12
CASP4-208ENST00000530309 DNAH14Q0VDD8 3507 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 TRANK1O15050 2925 aa1.82□□□□□ -2.12
CASP4-208ENST00000530309 HELZ2Q9BYK8 2649 aaKnown RBP1.81□□□□□ -2.12
CASP4-208ENST00000530309 TRBV7-6A0A0J9YX20 115 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 FAM236DA0A1B0GTK5 79 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 CLPSL1A2RUU4 121 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 ERC2-IT1O76042 136 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 CCKP06307 115 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 FAM236CP0DP71 79 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 Q1T7F1 81 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 PRR15Q8IV56 129 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 FAM223AQ8IWN6 122 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 CLEC2BQ92478 149 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 LEAP2Q969E1 77 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 TANC2Q9HCD6 1990 aa1.81□□□□□ -2.12
CASP4-208ENST00000530309 ASCC3Q8N3C0 2202 aaKnown RBP1.81□□□□□ -2.12
CASP4-208ENST00000530309 DIDO1Q9BTC0 2240 aaKnown RBP1.81□□□□□ -2.12
CASP4-208ENST00000530309 SZT2Q5T011 3432 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 IGHV1-58A0A0C4DH39 117 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 LCE6AA0A183 80 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 BAALC-AS2P0C853 105 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 RNASE3P12724 160 aaKnown RBP1.8□□□□□ -2.12
CASP4-208ENST00000530309 NPC2P61916 151 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 SOSTDC1Q6X4U4 206 aa1.8□□□□□ -2.12
CASP4-208ENST00000530309 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms