RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
CTSB-216ENST00000530290 OSTCQ9NRP0 149 aa3.19□□□□□ -1.9
CTSB-216ENST00000530290 SPINK1P00995 79 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 RAB5AP20339 215 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 CKS2P33552 79 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 HERVK_113P63121 156 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 C6orf226Q5I0X4 101 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 PAPPA-AS1Q5QFB9 102 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 FAM104BQ5XKR9 115 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 ALKBH7Q9BT30 221 aaPredicted RBP3.18□□□□□ -1.9
CTSB-216ENST00000530290 XAGE1AQ9HD64 81 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
CTSB-216ENST00000530290 ZNF706Q9Y5V0 76 aaPredicted RBP3.18□□□□□ -1.9
CTSB-216ENST00000530290 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 F8W036 122 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 SMKR1H3BMG3 65 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 K7EMI3 77 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 PNRC1Q12796 327 aaPredicted RBP3.17□□□□□ -1.9
CTSB-216ENST00000530290 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
CTSB-216ENST00000530290 XP32Q5T750 250 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 FAM19A3Q7Z5A8 133 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 LINC00469Q8N7U9 141 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 EIF5A2Q9GZV4 153 aaKnown RBP3.17□□□□□ -1.9
CTSB-216ENST00000530290 GEMIN7Q9H840 131 aaKnown RBP3.17□□□□□ -1.9
CTSB-216ENST00000530290 TOMM7Q9P0U1 55 aa3.17□□□□□ -1.9
CTSB-216ENST00000530290 USH2AO75445 5202 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 RPL37AP8A6NKH3 93 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 G0S2P27469 103 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 LINC01551Q86U37 167 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 AMELXQ99217 191 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 SMIM7Q9BQ49 75 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 CYSLTR1Q9Y271 337 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 LAMTOR2Q9Y2Q5 125 aa3.16□□□□□ -1.9
CTSB-216ENST00000530290 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
CTSB-216ENST00000530290 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
CTSB-216ENST00000530290 D6R8Y8 96 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 FAM74A3Q4VXF1 159 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 FAM19A1Q7Z5A9 133 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 SLC51BQ86UW2 128 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 VCX2Q9H322 139 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 V9GYV3 84 aa3.15□□□□□ -1.91
CTSB-216ENST00000530290 GAGE10A6NGK3 116 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 SMLR1H3BR10 107 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 SLC25A20O43772 301 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 BLOC1S1P78537 153 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 MT1HP80294 61 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 PRLHP81277 87 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
CTSB-216ENST00000530290 RGS21Q2M5E4 152 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 PDZD11Q5EBL8 140 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 CBLN2Q8IUK8 224 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 TMEM126AQ9H061 195 aa3.14□□□□□ -1.91
CTSB-216ENST00000530290 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
CTSB-216ENST00000530290 IGKV2-28A0A075B6P5 120 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 SMIM27A0A1W2PRY6 76 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 PRSS47A8MTI9 375 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 NPYP01303 97 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 IGKV2D-28P01615 120 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 CEBPGP53567 150 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 ORMDL2Q53FV1 153 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 SFTA2Q6UW10 78 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 ATP5L2Q7Z4Y8 100 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 Q8NBF4 154 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 MAP1LC3AQ9H492 121 aa3.13□□□□□ -1.91
CTSB-216ENST00000530290 SMIM1B2RUZ4 78 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 ATP5LO75964 103 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
CTSB-216ENST00000530290 COX17Q14061 63 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 KRTAP19-2Q3LHN2 52 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 COX7B2Q8TF08 81 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 TIMM17AQ99595 171 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 HIGD2AQ9BW72 106 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 CDKN2A-AS1Q9UH64 79 aa3.12□□□□□ -1.91
CTSB-216ENST00000530290 IGLV5-45A0A087WSX0 123 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 A0A1B0GXF2 115 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 IGIPA6NJ69 53 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 M0R378 163 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 VPREB1P12018 145 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 Q8N377 158 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 Q8N8P6 123 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 PRELID3AQ96N28 172 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 MRPL18Q9H0U6 180 aaKnown RBP3.11□□□□□ -1.91
CTSB-216ENST00000530290 BATF3Q9NR55 127 aa3.11□□□□□ -1.91
CTSB-216ENST00000530290 TINCRA0A1B0GVN0 87 aa3.1□□□□□ -1.91
CTSB-216ENST00000530290 H3BRM9 83 aa3.1□□□□□ -1.91
CTSB-216ENST00000530290 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
CTSB-216ENST00000530290 SSBP3-AS1Q7Z2R9 100 aa3.1□□□□□ -1.91
CTSB-216ENST00000530290 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
CTSB-216ENST00000530290 TMEM238C9JI98 176 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms