RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TMEM191AQ9H0A3 160 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 PLAC8Q9NZF1 115 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 TMEM250H0YL14 139 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 ARMS2P0C7Q2 107 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 ARL14EPLP0DKL9 152 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 HINT1P49773 126 aaPredicted RBP2.2□□□□□ -2.06
PTPRC-213ENST00000529828 CNBPP62633 177 aaKnown RBP2.2□□□□□ -2.06
PTPRC-213ENST00000529828 COX6A2Q02221 97 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 ST20Q9HBF5 79 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV7-3A0A075B6L6 115 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 FXYD6-FXYD2A0A087WZ82 144 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV6-1A0A0K0K1D8 114 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 LOC107984640A0A0U1RRK4 108 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 H2BFSP57053 126 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 GAGE2BQ13066 116 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 ZNF56Q15929 161 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 PMCHL1Q16048 86 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 GAGE2EQ4V326 116 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 REG3GQ6UW15 175 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 HRCT1Q6UXD1 115 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 NEXN-AS1Q8NBZ9 246 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 PRSS3P2Q8NHM4 247 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 TMEM167BQ9NRX6 74 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 IL36BQ9NZH7 164 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 GAGE2DQ9UEU5 116 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 PAM16Q9Y3D7 125 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 PHLDA3Q9Y5J5 127 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
PTPRC-213ENST00000529828 MUC21A0A140T8X8 626 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 CTXND1A0A1B0GTU2 59 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 FAM240AA0A1B0GVK7 77 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 C9orf118A6NHY6 69 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 SH2D1AO60880 128 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 CXorf1O96002 111 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 SRSF3P84103 164 aaKnown RBP2.19□□□□□ -2.06
PTPRC-213ENST00000529828 RPL18AQ02543 176 aaKnown RBP2.19□□□□□ -2.06
PTPRC-213ENST00000529828 REG3AQ06141 175 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 NTM-AS1Q6ZSK4 140 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 RNF185Q96GF1 192 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 NAA38Q9BRA0 125 aaKnown RBP2.19□□□□□ -2.06
PTPRC-213ENST00000529828 GFRA4Q9GZZ7 299 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 CYTL1Q9NRR1 136 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 PRR34Q9NV39 138 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
PTPRC-213ENST00000529828 IGKV3OR2-268A0A0C4DH90 116 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV10-1A0A0K0K1A3 114 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 H3BRM9 83 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 BCL2P10415 239 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 GCHFRP30047 84 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 CRIP1P50238 77 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 FOXI1Q12951 378 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 PIK3CD-AS1Q5SR53 167 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 LYRM7Q5U5X0 104 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 Q5XG85 94 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 GAGE2AQ6NT46 116 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 Q86TA4 180 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 PRR26Q8N8Z3 221 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 C15orf56Q8N910 161 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 NUP35Q8NFH5 326 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 IGLV4-60A0A075B6I1 120 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 A0A096LNI7 61 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 H7C1H1 209 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 TMEM258P61165 79 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 SPINK6Q6UWN8 80 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 LINC01561Q8N1V8 128 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 C20orf203Q8NBC4 194 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 OR10G8Q8NGN5 311 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 OR10AG1Q8NH19 301 aa2.18□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV25-1A0A075B6N4 114 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 TRAV26-2A0A0B4J265 109 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 F5H697 171 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 J3QQQ9 107 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 UQCRQO14949 82 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 P01737 135 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 CXCL1P09341 107 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 FGF6P10767 208 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 FABP2P12104 132 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 HERVK_113P63121 156 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 KIAA1644Q3SXP7 199 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 Q6ZVH6 145 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 ATOH7Q8N100 152 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 RAB37Q96AX2 223 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 IGHV1-24A0A0C4DH33 117 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 A0A1B0GWB2 263 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 PEX7O00628 323 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 MT-ND6P03923 174 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 MT-ATP8P03928 68 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 SRSF9Q13242 221 aaKnown RBP eCLIP2.17□□□□□ -2.06
PTPRC-213ENST00000529828 PRR4Q16378 134 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 SPCS1Q9Y6A9 102 aa2.17□□□□□ -2.06
PTPRC-213ENST00000529828 SNCGO76070 127 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 MGPP08493 103 aa2.16□□□□□ -2.06
PTPRC-213ENST00000529828 PFN2P35080 140 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms