RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TRBV24-1A0A075B6N3 115 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 PPP1R2P9O14990 202 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 NUPR1O60356 82 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 RAB4AP20338 218 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 SUMO2P61956 95 aaKnown RBP5.31□□□□□ -1.56
VPS11-203ENST00000529545 FAM231DQ6ZW35 169 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 AMN1Q8IY45 258 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 TYMSOSQ8TAI1 123 aa5.31□□□□□ -1.56
VPS11-203ENST00000529545 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
VPS11-203ENST00000529545 TGIF2-C20orf24A0A0A6YYL0 155 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 TCAPO15273 167 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BKO60814 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BJP06899 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 CRYGAP11844 174 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BOP23527 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BBP33778 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BDP58876 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BCP62807 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST2H2BEQ16778 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 CT83Q5H943 113 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BHQ93079 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 C14orf144Q96I85 54 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BNQ99877 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 HIST1H2BMQ99879 126 aa5.3□□□□□ -1.56
VPS11-203ENST00000529545 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 SMKR1H3BMG3 65 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 RPL28P46779 137 aaKnown RBP5.29□□□□□ -1.56
VPS11-203ENST00000529545 HBBP68871 147 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 RIGQ13278 110 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 LBHQ53QV2 105 aaPredicted RBP5.29□□□□□ -1.56
VPS11-203ENST00000529545 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 C2orf88Q9BSF0 95 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 CTDSP1Q9GZU7 261 aa5.29□□□□□ -1.56
VPS11-203ENST00000529545 EIF5A2Q9GZV4 153 aaKnown RBP5.29□□□□□ -1.56
VPS11-203ENST00000529545 NDUFA6P56556 154 aa5.28□□□□□ -1.56
VPS11-203ENST00000529545 PNRC1Q12796 327 aaPredicted RBP5.28□□□□□ -1.56
VPS11-203ENST00000529545 JOSD1Q15040 202 aaPredicted RBP5.28□□□□□ -1.56
VPS11-203ENST00000529545 SPANXA1Q9NS26 97 aa5.28□□□□□ -1.56
VPS11-203ENST00000529545 A0A087X002 238 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
VPS11-203ENST00000529545 MRPS36P82909 103 aaKnown RBP5.27□□□□□ -1.57
VPS11-203ENST00000529545 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
VPS11-203ENST00000529545 NRACQ8N912 160 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 C20orf78Q9BR46 151 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
VPS11-203ENST00000529545 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 TMEM250H0YL14 139 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 TRGC2P03986 189 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 CEBPGP53567 150 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 KIAA0087Q14695 138 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 C2orf82Q6UX34 121 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 HIST1H2BLQ99880 126 aa5.26□□□□□ -1.57
VPS11-203ENST00000529545 PRSS2P07478 247 aa5.25□□□□□ -1.57
VPS11-203ENST00000529545 S100A2P29034 98 aa5.25□□□□□ -1.57
VPS11-203ENST00000529545 CKS1BP61024 79 aa5.25□□□□□ -1.57
VPS11-203ENST00000529545 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
VPS11-203ENST00000529545 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
VPS11-203ENST00000529545 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
VPS11-203ENST00000529545 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 BCE1O60756 84 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 DDTP30046 118 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 CKS2P33552 79 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
VPS11-203ENST00000529545 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
VPS11-203ENST00000529545 FAM104BQ5XKR9 115 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 OSTCQ9NRP0 149 aa5.24□□□□□ -1.57
VPS11-203ENST00000529545 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
VPS11-203ENST00000529545 C6orf226Q5I0X4 101 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 MRPL55Q7Z7F7 128 aaKnown RBP5.23□□□□□ -1.57
VPS11-203ENST00000529545 LINC01561Q8N1V8 128 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 TP73-AS1Q9UF72 201 aa5.23□□□□□ -1.57
VPS11-203ENST00000529545 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 A0A1B0GV90 55 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 Q6ZN92 141 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 LINC01551Q86U37 167 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 NAT8Q9UHE5 227 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 NAT8BQ9UHF3 227 aa5.22□□□□□ -1.57
VPS11-203ENST00000529545 UBE2AP49459 152 aa5.21□□□□□ -1.58
VPS11-203ENST00000529545 RPL23P62829 140 aaKnown RBP5.21□□□□□ -1.58
VPS11-203ENST00000529545 TEX43Q6ZNM6 134 aa5.21□□□□□ -1.58
VPS11-203ENST00000529545 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
VPS11-203ENST00000529545 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
VPS11-203ENST00000529545 A0A1B0GW15 77 aa5.2□□□□□ -1.58
VPS11-203ENST00000529545 FABP4P15090 132 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms