RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 LINC00469Q8N7U9 141 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 C2orf88Q9BSF0 95 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
HIF3A-212ENST00000529205 S100A8P05109 93 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 CBLN2Q8IUK8 224 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 TMEM141Q96I45 108 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 XAGE1AQ9HD64 81 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
HIF3A-212ENST00000529205 D6R8Y8 96 aa7.89□□□□□ -1.15
HIF3A-212ENST00000529205 SCO1O75880 301 aa7.89□□□□□ -1.15
HIF3A-212ENST00000529205 PPBPP02775 128 aa7.89□□□□□ -1.15
HIF3A-212ENST00000529205 TMEM136Q6ZRR5 245 aa7.89□□□□□ -1.15
HIF3A-212ENST00000529205 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
HIF3A-212ENST00000529205 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
HIF3A-212ENST00000529205 IGLV4-3A0A075B6K6 122 aa7.88□□□□□ -1.15
HIF3A-212ENST00000529205 SNAPINO95295 136 aa7.88□□□□□ -1.15
HIF3A-212ENST00000529205 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
HIF3A-212ENST00000529205 Q8IZM0 81 aa7.88□□□□□ -1.15
HIF3A-212ENST00000529205 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
HIF3A-212ENST00000529205 NPYP01303 97 aa7.87□□□□□ -1.15
HIF3A-212ENST00000529205 CTAG1AP78358 180 aa7.87□□□□□ -1.15
HIF3A-212ENST00000529205 ATP5L2Q7Z4Y8 100 aa7.87□□□□□ -1.15
HIF3A-212ENST00000529205 IGKV2D-26A0A0A0MRZ7 120 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 ATP6V1G1O75348 118 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 UBE2AP49459 152 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 VCX2Q9H322 139 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 ANAPC11Q9NYG5 84 aa7.86□□□□□ -1.15
HIF3A-212ENST00000529205 F8VRH5 84 aa7.85□□□□□ -1.15
HIF3A-212ENST00000529205 ORMDL3Q8N138 153 aa7.85□□□□□ -1.15
HIF3A-212ENST00000529205 TRAV9-1A0A075B6T8 112 aa7.84□□□□□ -1.15
HIF3A-212ENST00000529205 RPL37AP8A6NKH3 93 aa7.84□□□□□ -1.15
HIF3A-212ENST00000529205 SEC11AP67812 179 aa7.84□□□□□ -1.15
HIF3A-212ENST00000529205 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
HIF3A-212ENST00000529205 CXCL5P42830 114 aa7.83□□□□□ -1.16
HIF3A-212ENST00000529205 KIAA1644Q3SXP7 199 aa7.83□□□□□ -1.16
HIF3A-212ENST00000529205 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
HIF3A-212ENST00000529205 PRELID3AQ96N28 172 aa7.83□□□□□ -1.16
HIF3A-212ENST00000529205 CYSLTR1Q9Y271 337 aa7.83□□□□□ -1.16
HIF3A-212ENST00000529205 COLCA2A8K830 154 aa7.82□□□□□ -1.16
HIF3A-212ENST00000529205 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
HIF3A-212ENST00000529205 HERVK_113P63121 156 aa7.82□□□□□ -1.16
HIF3A-212ENST00000529205 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 NPSP0C0P6 89 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 PAPPA-AS1Q5QFB9 102 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 C2orf66Q6UXQ4 117 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 GEMIN7Q9H840 131 aaKnown RBP7.81□□□□□ -1.16
HIF3A-212ENST00000529205 SMCO4Q9NRQ5 59 aa7.81□□□□□ -1.16
HIF3A-212ENST00000529205 LOC389332A0A1B0GUA5 103 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 S100PP25815 95 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 AMELXQ99217 191 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 GNB1LQ9BYB4 327 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
HIF3A-212ENST00000529205 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
HIF3A-212ENST00000529205 ORMDL2Q53FV1 153 aa7.79□□□□□ -1.16
HIF3A-212ENST00000529205 ZC2HC1BQ5TFG8 222 aa7.79□□□□□ -1.16
HIF3A-212ENST00000529205 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
HIF3A-212ENST00000529205 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
HIF3A-212ENST00000529205 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
HIF3A-212ENST00000529205 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
HIF3A-212ENST00000529205 CDKN2A-AS1Q9UH64 79 aa7.78□□□□□ -1.16
HIF3A-212ENST00000529205 G0S2P27469 103 aa7.77□□□□□ -1.17
HIF3A-212ENST00000529205 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
HIF3A-212ENST00000529205 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
HIF3A-212ENST00000529205 URB1-AS1Q96HZ7 61 aa7.77□□□□□ -1.17
HIF3A-212ENST00000529205 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
HIF3A-212ENST00000529205 K7EMI3 77 aa7.76□□□□□ -1.17
HIF3A-212ENST00000529205 FABP9Q0Z7S8 132 aa7.76□□□□□ -1.17
HIF3A-212ENST00000529205 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
HIF3A-212ENST00000529205 Q8N8P6 123 aa7.76□□□□□ -1.17
HIF3A-212ENST00000529205 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 RAB5BP61020 215 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
HIF3A-212ENST00000529205 FAM19A1Q7Z5A9 133 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 TRAPPC1Q9Y5R8 145 aa7.75□□□□□ -1.17
HIF3A-212ENST00000529205 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
HIF3A-212ENST00000529205 PDZD11Q5EBL8 140 aa7.74□□□□□ -1.17
HIF3A-212ENST00000529205 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
HIF3A-212ENST00000529205 S100A1P23297 94 aa7.73□□□□□ -1.17
HIF3A-212ENST00000529205 PRLHP81277 87 aa7.73□□□□□ -1.17
HIF3A-212ENST00000529205 TRGC2P03986 189 aa7.72□□□□□ -1.17
HIF3A-212ENST00000529205 COX19Q49B96 90 aa7.72□□□□□ -1.17
HIF3A-212ENST00000529205 CRCT1Q9UGL9 99 aa7.72□□□□□ -1.17
HIF3A-212ENST00000529205 LINC01546A6NGU7 62 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 SMIM1B2RUZ4 78 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 LINC00310P59036 64 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
HIF3A-212ENST00000529205 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 C18orf32Q8TCD1 76 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 TIMM17AQ99595 171 aa7.71□□□□□ -1.18
HIF3A-212ENST00000529205 NXT2Q9NPJ8 142 aaKnown RBP7.71□□□□□ -1.18
HIF3A-212ENST00000529205 ATP5LO75964 103 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms