RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 FAM19A3Q7Z5A8 133 aa8.9□□□□□ -0.98
CAPN1-216ENST00000528739 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-216ENST00000528739 FAM168BA1KXE4 195 aa8.89□□□□□ -0.99
CAPN1-216ENST00000528739 PMVKQ15126 192 aa8.89□□□□□ -0.99
CAPN1-216ENST00000528739 Q8IZM0 81 aa8.89□□□□□ -0.99
CAPN1-216ENST00000528739 CST9LQ9H4G1 147 aa8.89□□□□□ -0.99
CAPN1-216ENST00000528739 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
CAPN1-216ENST00000528739 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
CAPN1-216ENST00000528739 RAB5BP61020 215 aa8.88□□□□□ -0.99
CAPN1-216ENST00000528739 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
CAPN1-216ENST00000528739 C18orf32Q8TCD1 76 aa8.88□□□□□ -0.99
CAPN1-216ENST00000528739 UBE2BP63146 152 aa8.87□□□□□ -0.99
CAPN1-216ENST00000528739 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
CAPN1-216ENST00000528739 HBDP02042 147 aa8.86□□□□□ -0.99
CAPN1-216ENST00000528739 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
CAPN1-216ENST00000528739 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
CAPN1-216ENST00000528739 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
CAPN1-216ENST00000528739 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
CAPN1-216ENST00000528739 F8VRH5 84 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 H3BRM9 83 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 CXCL5P42830 114 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 PDZD11Q5EBL8 140 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 REG3GQ6UW15 175 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 PKHD1L1Q86WI1 4243 aa8.85□□□□□ -0.99
CAPN1-216ENST00000528739 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
CAPN1-216ENST00000528739 SMIM1B2RUZ4 78 aa8.84□□□□□ -0.99
CAPN1-216ENST00000528739 M0QXV9 152 aa8.84□□□□□ -0.99
CAPN1-216ENST00000528739 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
CAPN1-216ENST00000528739 ATP5LO75964 103 aa8.83□□□□□ -1
CAPN1-216ENST00000528739 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
CAPN1-216ENST00000528739 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
CAPN1-216ENST00000528739 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
CAPN1-216ENST00000528739 BAGE3Q86Y29 109 aa8.82□□□□□ -1
CAPN1-216ENST00000528739 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
CAPN1-216ENST00000528739 IGLV5-45A0A087WSX0 123 aa8.81□□□□□ -1
CAPN1-216ENST00000528739 A0A096LNJ9 63 aa8.81□□□□□ -1
CAPN1-216ENST00000528739 SLC7A5P1Q8MH63 180 aa8.81□□□□□ -1
CAPN1-216ENST00000528739 SRSF9Q13242 221 aaKnown RBP eCLIP8.8□□□□□ -1
CAPN1-216ENST00000528739 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
CAPN1-216ENST00000528739 IGLC3P0DOY3 106 aa8.79□□□□□ -1
CAPN1-216ENST00000528739 LINC01600Q96MT4 127 aa8.79□□□□□ -1
CAPN1-216ENST00000528739 IGLV7-43P04211 117 aa8.78□□□□□ -1
CAPN1-216ENST00000528739 MT1HL1P0DM35 61 aa8.78□□□□□ -1
CAPN1-216ENST00000528739 CHCHD1Q96BP2 118 aaKnown RBP8.78□□□□□ -1
CAPN1-216ENST00000528739 YPEL4Q96NS1 127 aa8.78□□□□□ -1
CAPN1-216ENST00000528739 PLA2G2DQ9UNK4 145 aa8.78□□□□□ -1
CAPN1-216ENST00000528739 C22orf24Q9Y442 160 aa8.78□□□□□ -1
CAPN1-216ENST00000528739 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
CAPN1-216ENST00000528739 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
CAPN1-216ENST00000528739 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
CAPN1-216ENST00000528739 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
CAPN1-216ENST00000528739 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
CAPN1-216ENST00000528739 HSBP1O75506 76 aa8.76□□□□□ -1.01
CAPN1-216ENST00000528739 PFN2P35080 140 aa8.76□□□□□ -1.01
CAPN1-216ENST00000528739 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
CAPN1-216ENST00000528739 TRGC2P03986 189 aa8.75□□□□□ -1.01
CAPN1-216ENST00000528739 DIRC1Q969H9 104 aa8.75□□□□□ -1.01
CAPN1-216ENST00000528739 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
CAPN1-216ENST00000528739 H0Y8G0 127 aa8.74□□□□□ -1.01
CAPN1-216ENST00000528739 FAM19A2Q8N3H0 131 aa8.74□□□□□ -1.01
CAPN1-216ENST00000528739 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
CAPN1-216ENST00000528739 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
CAPN1-216ENST00000528739 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
CAPN1-216ENST00000528739 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
CAPN1-216ENST00000528739 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
CAPN1-216ENST00000528739 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
CAPN1-216ENST00000528739 ERG28Q9UKR5 140 aa8.71□□□□□ -1.02
CAPN1-216ENST00000528739 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
CAPN1-216ENST00000528739 H0Y9J4 135 aa8.7□□□□□ -1.02
CAPN1-216ENST00000528739 NUPR1O60356 82 aa8.7□□□□□ -1.02
CAPN1-216ENST00000528739 LEPROTL1O95214 131 aa8.69□□□□□ -1.02
CAPN1-216ENST00000528739 ODF1Q14990 250 aa8.69□□□□□ -1.02
CAPN1-216ENST00000528739 LINC00167Q96N53 147 aa8.69□□□□□ -1.02
CAPN1-216ENST00000528739 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
CAPN1-216ENST00000528739 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
CAPN1-216ENST00000528739 SERF1AO75920 110 aa8.68□□□□□ -1.02
CAPN1-216ENST00000528739 LINC00158P58513 81 aa8.68□□□□□ -1.02
CAPN1-216ENST00000528739 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
CAPN1-216ENST00000528739 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
CAPN1-216ENST00000528739 A0A0U1RRA0 63 aa8.67□□□□□ -1.02
CAPN1-216ENST00000528739 TMEM223A0PJW6 202 aa8.67□□□□□ -1.02
CAPN1-216ENST00000528739 FABP4P15090 132 aa8.67□□□□□ -1.02
CAPN1-216ENST00000528739 COX17Q14061 63 aa8.67□□□□□ -1.02
CAPN1-216ENST00000528739 ZNF861PO60384 105 aa8.66□□□□□ -1.02
CAPN1-216ENST00000528739 RPL24P83731 157 aaKnown RBP8.66□□□□□ -1.02
CAPN1-216ENST00000528739 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
CAPN1-216ENST00000528739 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
CAPN1-216ENST00000528739 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 COLCA2A8K830 154 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 SCO1O75880 301 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.02
CAPN1-216ENST00000528739 BCE1O60756 84 aa8.64□□□□□ -1.03
CAPN1-216ENST00000528739 RPL28P46779 137 aaKnown RBP8.64□□□□□ -1.03
CAPN1-216ENST00000528739 UBE2AP49459 152 aa8.64□□□□□ -1.03
CAPN1-216ENST00000528739 TNXBP22105 4242 aa8.62□□□□□ -1.03
CAPN1-216ENST00000528739 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
CAPN1-216ENST00000528739 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms