RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 LINC00614P0C842 121 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 CKS1BP61024 79 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 PMVKQ15126 192 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 C2orf82Q6UX34 121 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 C18orf32Q8TCD1 76 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 CST9LQ9H4G1 147 aa7.53□□□□□ -1.2
TRAPPC4-209ENST00000528230 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 RAB5BP61020 215 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 TOMM7Q9P0U1 55 aa7.52□□□□□ -1.21
TRAPPC4-209ENST00000528230 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 SPINK6Q6UWN8 80 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 URB1-AS1Q96HZ7 61 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 YPEL4Q96NS1 127 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
TRAPPC4-209ENST00000528230 A0A096LNJ9 63 aa7.5□□□□□ -1.21
TRAPPC4-209ENST00000528230 CXCL5P42830 114 aa7.5□□□□□ -1.21
TRAPPC4-209ENST00000528230 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAPPC4-209ENST00000528230 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
TRAPPC4-209ENST00000528230 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
TRAPPC4-209ENST00000528230 F8VRH5 84 aa7.49□□□□□ -1.21
TRAPPC4-209ENST00000528230 HBDP02042 147 aa7.49□□□□□ -1.21
TRAPPC4-209ENST00000528230 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
TRAPPC4-209ENST00000528230 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
TRAPPC4-209ENST00000528230 FAM168BA1KXE4 195 aa7.48□□□□□ -1.21
TRAPPC4-209ENST00000528230 PSORS1C2Q9UIG4 136 aa7.48□□□□□ -1.21
TRAPPC4-209ENST00000528230 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
TRAPPC4-209ENST00000528230 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 H3BRM9 83 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 ATP5LO75964 103 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 IGLC3P0DOY3 106 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 ODF1Q14990 250 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 HERC1Q15751 4861 aa7.47□□□□□ -1.21
TRAPPC4-209ENST00000528230 REG3GQ6UW15 175 aa7.46□□□□□ -1.22
TRAPPC4-209ENST00000528230 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.22
TRAPPC4-209ENST00000528230 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-209ENST00000528230 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
TRAPPC4-209ENST00000528230 NDUFA6P56556 154 aa7.45□□□□□ -1.22
TRAPPC4-209ENST00000528230 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC4-209ENST00000528230 SPINK8P0C7L1 97 aa7.44□□□□□ -1.22
TRAPPC4-209ENST00000528230 PMCHL1Q16048 86 aa7.44□□□□□ -1.22
TRAPPC4-209ENST00000528230 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
TRAPPC4-209ENST00000528230 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
TRAPPC4-209ENST00000528230 M0QXV9 152 aa7.43□□□□□ -1.22
TRAPPC4-209ENST00000528230 BAGE3Q86Y29 109 aa7.43□□□□□ -1.22
TRAPPC4-209ENST00000528230 CBLN2Q8IUK8 224 aa7.43□□□□□ -1.22
TRAPPC4-209ENST00000528230 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
TRAPPC4-209ENST00000528230 UBE2BP63146 152 aa7.41□□□□□ -1.22
TRAPPC4-209ENST00000528230 LBHQ53QV2 105 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC4-209ENST00000528230 TP73-AS1Q9UF72 201 aa7.41□□□□□ -1.22
TRAPPC4-209ENST00000528230 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 PLA2G2DQ9UNK4 145 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 C22orf24Q9Y442 160 aa7.4□□□□□ -1.22
TRAPPC4-209ENST00000528230 HSBP1O75506 76 aa7.39□□□□□ -1.23
TRAPPC4-209ENST00000528230 TRGC2P03986 189 aa7.39□□□□□ -1.23
TRAPPC4-209ENST00000528230 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
TRAPPC4-209ENST00000528230 DIRC1Q969H9 104 aa7.39□□□□□ -1.23
TRAPPC4-209ENST00000528230 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
TRAPPC4-209ENST00000528230 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
TRAPPC4-209ENST00000528230 NUPR1O60356 82 aa7.37□□□□□ -1.23
TRAPPC4-209ENST00000528230 COX17Q14061 63 aa7.37□□□□□ -1.23
TRAPPC4-209ENST00000528230 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
TRAPPC4-209ENST00000528230 IGLV5-37A0A075B6J1 123 aa7.36□□□□□ -1.23
TRAPPC4-209ENST00000528230 COLCA2A8K830 154 aa7.36□□□□□ -1.23
TRAPPC4-209ENST00000528230 H0Y9J4 135 aa7.35□□□□□ -1.23
TRAPPC4-209ENST00000528230 FAM19A2Q8N3H0 131 aa7.35□□□□□ -1.23
TRAPPC4-209ENST00000528230 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
TRAPPC4-209ENST00000528230 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
TRAPPC4-209ENST00000528230 PFN2P35080 140 aa7.34□□□□□ -1.23
TRAPPC4-209ENST00000528230 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC4-209ENST00000528230 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
TRAPPC4-209ENST00000528230 ZNF861PO60384 105 aa7.33□□□□□ -1.24
TRAPPC4-209ENST00000528230 SERF1AO75920 110 aa7.33□□□□□ -1.24
TRAPPC4-209ENST00000528230 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
TRAPPC4-209ENST00000528230 LINC00310P59036 64 aa7.33□□□□□ -1.24
TRAPPC4-209ENST00000528230 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
TRAPPC4-209ENST00000528230 SND1-IT1Q9HBX3 110 aa7.32□□□□□ -1.24
TRAPPC4-209ENST00000528230 BCE1O60756 84 aa7.31□□□□□ -1.24
TRAPPC4-209ENST00000528230 RPL24P83731 157 aaKnown RBP7.31□□□□□ -1.24
TRAPPC4-209ENST00000528230 HSPB8Q9UJY1 196 aa7.31□□□□□ -1.24
TRAPPC4-209ENST00000528230 IGLV1-50A0A075B6I6 118 aa7.3□□□□□ -1.24
TRAPPC4-209ENST00000528230 RPL37AP8A6NKH3 93 aa7.3□□□□□ -1.24
TRAPPC4-209ENST00000528230 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
TRAPPC4-209ENST00000528230 VPREB1P12018 145 aa7.29□□□□□ -1.24
TRAPPC4-209ENST00000528230 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms