RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CHD8Q9HCK8 2581 aa10.17□□□□□ -0.78
CAPN1-214ENST00000528165 ZANQ9Y493 2812 aa10.16□□□□□ -0.78
CAPN1-214ENST00000528165 GIG44P09565 113 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-214ENST00000528165 A0A1W2PRX2 142 aa10.15□□□□□ -0.78
CAPN1-214ENST00000528165 FAM236DA0A1B0GTK5 79 aa10.15□□□□□ -0.78
CAPN1-214ENST00000528165 FAM236CP0DP71 79 aa10.15□□□□□ -0.78
CAPN1-214ENST00000528165 PLA2G2AP14555 144 aa10.15□□□□□ -0.79
CAPN1-214ENST00000528165 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.79
CAPN1-214ENST00000528165 MXRA5Q9NR99 2828 aa10.14□□□□□ -0.79
CAPN1-214ENST00000528165 USP9XQ93008 2570 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-214ENST00000528165 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
CAPN1-214ENST00000528165 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
CAPN1-214ENST00000528165 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
CAPN1-214ENST00000528165 IGHV4-31P0DP07 118 aa10.12□□□□□ -0.79
CAPN1-214ENST00000528165 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
CAPN1-214ENST00000528165 CHD6Q8TD26 2715 aa10.12□□□□□ -0.79
CAPN1-214ENST00000528165 SPTBN4Q9H254 2564 aa10.12□□□□□ -0.79
CAPN1-214ENST00000528165 CCL24O00175 119 aa10.11□□□□□ -0.79
CAPN1-214ENST00000528165 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
CAPN1-214ENST00000528165 Q6ZQT0 140 aa10.11□□□□□ -0.79
CAPN1-214ENST00000528165 ANKRD17O75179 2603 aaKnown RBP10.11□□□□□ -0.79
CAPN1-214ENST00000528165 CMC4P56277 68 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-214ENST00000528165 COX17Q14061 63 aa10.11□□□□□ -0.79
CAPN1-214ENST00000528165 LAMTOR3Q9UHA4 124 aa10.11□□□□□ -0.79
CAPN1-214ENST00000528165 DOPEY1Q5JWR5 2465 aa10.1□□□□□ -0.79
CAPN1-214ENST00000528165 BCE1O60756 84 aa10.1□□□□□ -0.79
CAPN1-214ENST00000528165 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
CAPN1-214ENST00000528165 ZNF561-AS1K7EIQ3 104 aa10.1□□□□□ -0.79
CAPN1-214ENST00000528165 LINC00575Q6W349 94 aa10.1□□□□□ -0.79
CAPN1-214ENST00000528165 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 H7BZZ5 65 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 HAMPP81172 84 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 JMJD1CQ15652 2540 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 SERP1Q9Y6X1 66 aa10.09□□□□□ -0.79
CAPN1-214ENST00000528165 LINC01547P58512 204 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-214ENST00000528165 GYPEP15421 78 aa10.08□□□□□ -0.8
CAPN1-214ENST00000528165 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
CAPN1-214ENST00000528165 POLQO75417 2590 aa10.07□□□□□ -0.8
CAPN1-214ENST00000528165 CUBNO60494 3623 aa10.07□□□□□ -0.8
CAPN1-214ENST00000528165 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
CAPN1-214ENST00000528165 C9orf116Q5BN46 136 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-214ENST00000528165 Q6ZVQ6 151 aa10.06□□□□□ -0.8
CAPN1-214ENST00000528165 LINC00482Q8N8I6 264 aa10.06□□□□□ -0.8
CAPN1-214ENST00000528165 CR1P17927 2039 aa10.06□□□□□ -0.8
CAPN1-214ENST00000528165 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
CAPN1-214ENST00000528165 KLKP1Q107X0 134 aa10.05□□□□□ -0.8
CAPN1-214ENST00000528165 M0R2N4 97 aa10.05□□□□□ -0.8
CAPN1-214ENST00000528165 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
CAPN1-214ENST00000528165 Q8NDZ9 215 aa10.05□□□□□ -0.8
CAPN1-214ENST00000528165 EPM2AB3EWF7 344 aa10.04□□□□□ -0.8
CAPN1-214ENST00000528165 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
CAPN1-214ENST00000528165 FLNCQ14315 2725 aa10.04□□□□□ -0.8
CAPN1-214ENST00000528165 TRAV10A0A0B4J240 114 aa10.04□□□□□ -0.8
CAPN1-214ENST00000528165 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
CAPN1-214ENST00000528165 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
CAPN1-214ENST00000528165 A0A096LPF7 62 aa10.03□□□□□ -0.8
CAPN1-214ENST00000528165 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
CAPN1-214ENST00000528165 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.8
CAPN1-214ENST00000528165 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.8
CAPN1-214ENST00000528165 C19orf73Q9NVV2 129 aa10.02□□□□□ -0.8
CAPN1-214ENST00000528165 PDE6GP18545 87 aa10.02□□□□□ -0.81
CAPN1-214ENST00000528165 CXCL6P80162 114 aa10.02□□□□□ -0.81
CAPN1-214ENST00000528165 RMI2Q96E14 147 aa10.02□□□□□ -0.81
CAPN1-214ENST00000528165 Q6ZQY7 126 aa10.01□□□□□ -0.81
CAPN1-214ENST00000528165 ZNF843Q8N446 348 aa10.01□□□□□ -0.81
CAPN1-214ENST00000528165 SETXQ7Z333 2677 aaKnown RBP10.01□□□□□ -0.81
CAPN1-214ENST00000528165 EPG5Q9HCE0 2579 aa10.01□□□□□ -0.81
CAPN1-214ENST00000528165 UTP20O75691 2785 aaKnown RBP10□□□□□ -0.81
CAPN1-214ENST00000528165 F8WEM9 126 aa10□□□□□ -0.81
CAPN1-214ENST00000528165 TEX15Q9BXT5 2789 aa9.99□□□□□ -0.81
CAPN1-214ENST00000528165 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
CAPN1-214ENST00000528165 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
CAPN1-214ENST00000528165 Q8N3U1 123 aa9.99□□□□□ -0.81
CAPN1-214ENST00000528165 PRO0255Q9UI72 69 aa9.99□□□□□ -0.81
CAPN1-214ENST00000528165 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
CAPN1-214ENST00000528165 H3BQ85 93 aa9.98□□□□□ -0.81
CAPN1-214ENST00000528165 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
CAPN1-214ENST00000528165 FBN2P35556 2912 aa9.98□□□□□ -0.81
CAPN1-214ENST00000528165 BBC3Q96PG8 261 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-214ENST00000528165 ACACBO00763 2458 aa9.98□□□□□ -0.81
CAPN1-214ENST00000528165 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 REG3AQ06141 175 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 IGLV6-57P01721 117 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 LINC01006Q8NI28 216 aa9.97□□□□□ -0.81
CAPN1-214ENST00000528165 PKD1L2Q7Z442 2459 aa9.96□□□□□ -0.81
CAPN1-214ENST00000528165 LRRK2Q5S007 2527 aa9.96□□□□□ -0.81
CAPN1-214ENST00000528165 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.81
CAPN1-214ENST00000528165 LINC00336Q6ZUF6 198 aa9.96□□□□□ -0.81
CAPN1-214ENST00000528165 PRO0628Q9UI54 55 aa9.96□□□□□ -0.81
CAPN1-214ENST00000528165 NBPF19A0A087WUL8 3843 aa9.96□□□□□ -0.82
CAPN1-214ENST00000528165 NDUFC1O43677 76 aa9.96□□□□□ -0.82
CAPN1-214ENST00000528165 SPATA3Q8NHX4 192 aa9.96□□□□□ -0.82
CAPN1-214ENST00000528165 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms