RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 C6orf226Q5I0X4 101 aa16.41■□□□□ 0.22
TSPAN4-217ENST00000527644 CST9LQ9H4G1 147 aa16.41■□□□□ 0.22
TSPAN4-217ENST00000527644 CKS1BP61024 79 aa16.4■□□□□ 0.22
TSPAN4-217ENST00000527644 PMVKQ15126 192 aa16.39■□□□□ 0.21
TSPAN4-217ENST00000527644 LINC00469Q8N7U9 141 aa16.39■□□□□ 0.21
TSPAN4-217ENST00000527644 URB1-AS1Q96HZ7 61 aa16.39■□□□□ 0.21
TSPAN4-217ENST00000527644 GAGE2EQ4V326 116 aa16.38■□□□□ 0.21
TSPAN4-217ENST00000527644 YPEL4Q96NS1 127 aa16.38■□□□□ 0.21
TSPAN4-217ENST00000527644 GAGE2DQ9UEU5 116 aa16.38■□□□□ 0.21
TSPAN4-217ENST00000527644 NDUFC2-KCTD14E9PQ53 114 aa16.37■□□□□ 0.21
TSPAN4-217ENST00000527644 IGLV5-45A0A087WSX0 123 aa16.36■□□□□ 0.21
TSPAN4-217ENST00000527644 A0A096LNJ9 63 aa16.36■□□□□ 0.21
TSPAN4-217ENST00000527644 RAB5BP61020 215 aa16.36■□□□□ 0.21
TSPAN4-217ENST00000527644 HBDP02042 147 aa16.34■□□□□ 0.21
TSPAN4-217ENST00000527644 SMIM1B2RUZ4 78 aa16.33■□□□□ 0.2
TSPAN4-217ENST00000527644 PDZD11Q5EBL8 140 aa16.33■□□□□ 0.2
TSPAN4-217ENST00000527644 PHF5AQ7RTV0 110 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-217ENST00000527644 FAM168BA1KXE4 195 aa16.32■□□□□ 0.2
TSPAN4-217ENST00000527644 CXCL5P42830 114 aa16.32■□□□□ 0.2
TSPAN4-217ENST00000527644 F8VRH5 84 aa16.31■□□□□ 0.2
TSPAN4-217ENST00000527644 SPINK6Q6UWN8 80 aa16.3■□□□□ 0.2
TSPAN4-217ENST00000527644 PMCHL1Q16048 86 aa16.29■□□□□ 0.2
TSPAN4-217ENST00000527644 FAM19A5Q7Z5A7 132 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-217ENST00000527644 NDUFA6P56556 154 aa16.28■□□□□ 0.2
TSPAN4-217ENST00000527644 SRSF9Q13242 221 aaKnown RBP eCLIP16.28■□□□□ 0.2
TSPAN4-217ENST00000527644 CBLN2Q8IUK8 224 aa16.28■□□□□ 0.2
TSPAN4-217ENST00000527644 COX7B2Q8TF08 81 aa16.28■□□□□ 0.2
TSPAN4-217ENST00000527644 PSORS1C2Q9UIG4 136 aa16.28■□□□□ 0.2
TSPAN4-217ENST00000527644 H3BRM9 83 aa16.27■□□□□ 0.2
TSPAN4-217ENST00000527644 ATP5LO75964 103 aa16.27■□□□□ 0.2
TSPAN4-217ENST00000527644 IGLC3P0DOY3 106 aa16.27■□□□□ 0.2
TSPAN4-217ENST00000527644 C9orf129Q5T035 196 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-217ENST00000527644 SPINK8P0C7L1 97 aa16.26■□□□□ 0.19
TSPAN4-217ENST00000527644 KRTAP7-1Q8IUC3 87 aa16.25■□□□□ 0.19
TSPAN4-217ENST00000527644 SLC7A5P1Q8MH63 180 aa16.25■□□□□ 0.19
TSPAN4-217ENST00000527644 MT1HL1P0DM35 61 aa16.24■□□□□ 0.19
TSPAN4-217ENST00000527644 CHCHD1Q96BP2 118 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-217ENST00000527644 SERTAD4-AS1Q5TG53 156 aa16.23■□□□□ 0.19
TSPAN4-217ENST00000527644 M0QXV9 152 aa16.22■□□□□ 0.19
TSPAN4-217ENST00000527644 C1orf137Q5JT78 98 aa16.22■□□□□ 0.19
TSPAN4-217ENST00000527644 REG3GQ6UW15 175 aa16.2■□□□□ 0.18
TSPAN4-217ENST00000527644 BAGE3Q86Y29 109 aa16.2■□□□□ 0.18
TSPAN4-217ENST00000527644 LINC01600Q96MT4 127 aa16.2■□□□□ 0.18
TSPAN4-217ENST00000527644 ZNF22P17026 224 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-217ENST00000527644 XAGE1AQ9HD64 81 aa16.18■□□□□ 0.18
TSPAN4-217ENST00000527644 IGLV5-39A0A0G2JS06 123 aa16.17■□□□□ 0.18
TSPAN4-217ENST00000527644 KRTAP11-1Q8IUC1 163 aa16.17■□□□□ 0.18
TSPAN4-217ENST00000527644 UBE2BP63146 152 aa16.16■□□□□ 0.18
TSPAN4-217ENST00000527644 TRGC2P03986 189 aa16.15■□□□□ 0.18
TSPAN4-217ENST00000527644 IGLV7-43P04211 117 aa16.14■□□□□ 0.17
TSPAN4-217ENST00000527644 C11orf86A6NJI1 115 aa16.13■□□□□ 0.17
TSPAN4-217ENST00000527644 ODF1Q14990 250 aa16.13■□□□□ 0.17
TSPAN4-217ENST00000527644 IFI27L1Q96BM0 104 aa16.13■□□□□ 0.17
TSPAN4-217ENST00000527644 CHTOPQ9Y3Y2 248 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-217ENST00000527644 C22orf24Q9Y442 160 aa16.13■□□□□ 0.17
TSPAN4-217ENST00000527644 TNXBP22105 4242 aa16.11■□□□□ 0.17
TSPAN4-217ENST00000527644 TRAV12-1A0A0B4J245 112 aa16.11■□□□□ 0.17
TSPAN4-217ENST00000527644 HSBP1O75506 76 aa16.11■□□□□ 0.17
TSPAN4-217ENST00000527644 TMEM170BQ5T4T1 132 aa16.11■□□□□ 0.17
TSPAN4-217ENST00000527644 LBHQ53QV2 105 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-217ENST00000527644 TP73-AS1Q9UF72 201 aa16.09■□□□□ 0.17
TSPAN4-217ENST00000527644 FAM19A2Q8N3H0 131 aa16.07■□□□□ 0.16
TSPAN4-217ENST00000527644 DIRC1Q969H9 104 aa16.07■□□□□ 0.16
TSPAN4-217ENST00000527644 PLA2G2DQ9UNK4 145 aa16.07■□□□□ 0.16
TSPAN4-217ENST00000527644 COLCA2A8K830 154 aa16.06■□□□□ 0.16
TSPAN4-217ENST00000527644 HMCN2Q8NDA2 5059 aa16.05■□□□□ 0.16
TSPAN4-217ENST00000527644 KRTAP10-8P60410 259 aa16.05■□□□□ 0.16
TSPAN4-217ENST00000527644 SFTA2Q6UW10 78 aa16.05■□□□□ 0.16
TSPAN4-217ENST00000527644 MRPL55Q7Z7F7 128 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-217ENST00000527644 PFN2P35080 140 aa16.03■□□□□ 0.16
TSPAN4-217ENST00000527644 SERF1AO75920 110 aa16.02■□□□□ 0.16
TSPAN4-217ENST00000527644 ERG28Q9UKR5 140 aa16.02■□□□□ 0.16
TSPAN4-217ENST00000527644 TMEM223A0PJW6 202 aa16.01■□□□□ 0.15
TSPAN4-217ENST00000527644 NUPR1O60356 82 aa16.01■□□□□ 0.15
TSPAN4-217ENST00000527644 COX17Q14061 63 aa16.01■□□□□ 0.15
TSPAN4-217ENST00000527644 H0Y9J4 135 aa16■□□□□ 0.15
TSPAN4-217ENST00000527644 LINC00310P59036 64 aa16■□□□□ 0.15
TSPAN4-217ENST00000527644 IGLV5-37A0A075B6J1 123 aa15.99■□□□□ 0.15
TSPAN4-217ENST00000527644 LEPROTL1O95214 131 aa15.99■□□□□ 0.15
TSPAN4-217ENST00000527644 ZNF625Q96I27 306 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-217ENST00000527644 LINC00167Q96N53 147 aa15.98■□□□□ 0.15
TSPAN4-217ENST00000527644 NKAPP1Q8N9T2 125 aa15.96■□□□□ 0.15
TSPAN4-217ENST00000527644 SND1-IT1Q9HBX3 110 aa15.95■□□□□ 0.14
TSPAN4-217ENST00000527644 H0Y8G0 127 aa15.94■□□□□ 0.14
TSPAN4-217ENST00000527644 ZNF861PO60384 105 aa15.94■□□□□ 0.14
TSPAN4-217ENST00000527644 HSPB8Q9UJY1 196 aa15.94■□□□□ 0.14
TSPAN4-217ENST00000527644 RPL37AP8A6NKH3 93 aa15.93■□□□□ 0.14
TSPAN4-217ENST00000527644 GAGE10A6NGK3 116 aa15.92■□□□□ 0.14
TSPAN4-217ENST00000527644 BCE1O60756 84 aa15.9■□□□□ 0.14
TSPAN4-217ENST00000527644 FABP4P15090 132 aa15.89■□□□□ 0.13
TSPAN4-217ENST00000527644 RPL24P83731 157 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-217ENST00000527644 SCO1O75880 301 aa15.88■□□□□ 0.13
TSPAN4-217ENST00000527644 VPREB1P12018 145 aa15.88■□□□□ 0.13
TSPAN4-217ENST00000527644 LINC00158P58513 81 aa15.88■□□□□ 0.13
TSPAN4-217ENST00000527644 PLNP26678 52 aa15.87■□□□□ 0.13
TSPAN4-217ENST00000527644 RPL28P46779 137 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-217ENST00000527644 KRTAP1-4P0C5Y4 121 aa15.86■□□□□ 0.13
TSPAN4-217ENST00000527644 PRR26Q8N8Z3 221 aa15.86■□□□□ 0.13
TSPAN4-217ENST00000527644 HERV-K104P63124 156 aa15.85■□□□□ 0.13
TSPAN4-217ENST00000527644 IGLV1-50A0A075B6I6 118 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms