RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
CLNS1A-207ENST00000527133 ALKBH7Q9BT30 221 aaPredicted RBP7.47□□□□□ -1.21
CLNS1A-207ENST00000527133 RAB5AP20339 215 aa7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 FAM74A3Q4VXF1 159 aa7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 KRTAP13-1Q8IUC0 172 aa7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 Q8IZM0 81 aa7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 C2orf88Q9BSF0 95 aa7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 EIF5A2Q9GZV4 153 aaKnown RBP7.46□□□□□ -1.22
CLNS1A-207ENST00000527133 BLOC1S1P78537 153 aa7.45□□□□□ -1.22
CLNS1A-207ENST00000527133 A0A1B0GW15 77 aa7.44□□□□□ -1.22
CLNS1A-207ENST00000527133 SMIM27A0A1W2PRY6 76 aa7.44□□□□□ -1.22
CLNS1A-207ENST00000527133 F8VRH5 84 aa7.44□□□□□ -1.22
CLNS1A-207ENST00000527133 ALKAL2Q6UX46 152 aa7.44□□□□□ -1.22
CLNS1A-207ENST00000527133 F8W036 122 aa7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 S100A6P06703 90 aa7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 MRPL54Q6P161 138 aaKnown RBP7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 TCTE3Q8IZS6 198 aa7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
CLNS1A-207ENST00000527133 PPBPP02775 128 aa7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 VCX2Q9H322 139 aa7.42□□□□□ -1.22
CLNS1A-207ENST00000527133 RPL23P62829 140 aaKnown RBP7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 ADIRFQ15847 76 aa7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 AMELXQ99217 191 aa7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
CLNS1A-207ENST00000527133 IGKV2-28A0A075B6P5 120 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 IGKV2D-28P01615 120 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 S100A8P05109 93 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 PRLHP81277 87 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 CDKN2A-AS1Q9UH64 79 aa7.4□□□□□ -1.22
CLNS1A-207ENST00000527133 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 LOC389332A0A1B0GUA5 103 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 A0A1B0GXF2 115 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 SCO1O75880 301 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
CLNS1A-207ENST00000527133 CXCL5P42830 114 aa7.38□□□□□ -1.23
CLNS1A-207ENST00000527133 HERVK_113P63121 156 aa7.38□□□□□ -1.23
CLNS1A-207ENST00000527133 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
CLNS1A-207ENST00000527133 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
CLNS1A-207ENST00000527133 RAB14P61106 215 aa7.37□□□□□ -1.23
CLNS1A-207ENST00000527133 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
CLNS1A-207ENST00000527133 RAB5BP61020 215 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 SPAG11AQ6PDA7 123 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 FAM19A1Q7Z5A9 133 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 LINC00518Q8N0U6 118 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 NAT8Q9UHE5 227 aa7.36□□□□□ -1.23
CLNS1A-207ENST00000527133 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
CLNS1A-207ENST00000527133 TMEM238C9JI98 176 aa7.35□□□□□ -1.23
CLNS1A-207ENST00000527133 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
CLNS1A-207ENST00000527133 SEC11AP67812 179 aa7.35□□□□□ -1.23
CLNS1A-207ENST00000527133 PLEKHB2Q96CS7 222 aa7.35□□□□□ -1.23
CLNS1A-207ENST00000527133 PRSS47A8MTI9 375 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 SMIM1B2RUZ4 78 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 NPSP0C0P6 89 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 CLLU1Q5K131 121 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 Q8N8P6 123 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 COX7B2Q8TF08 81 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 TMEM126AQ9H061 195 aa7.34□□□□□ -1.23
CLNS1A-207ENST00000527133 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
CLNS1A-207ENST00000527133 CBLN2Q8IUK8 224 aa7.33□□□□□ -1.24
CLNS1A-207ENST00000527133 ORMDL2Q53FV1 153 aa7.32□□□□□ -1.24
CLNS1A-207ENST00000527133 COMMD7Q86VX2 200 aa7.32□□□□□ -1.24
CLNS1A-207ENST00000527133 LAMTOR2Q9Y2Q5 125 aa7.32□□□□□ -1.24
CLNS1A-207ENST00000527133 C9JQL5 133 aa7.31□□□□□ -1.24
CLNS1A-207ENST00000527133 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
CLNS1A-207ENST00000527133 PAPPA-AS1Q5QFB9 102 aa7.31□□□□□ -1.24
CLNS1A-207ENST00000527133 ATP5L2Q7Z4Y8 100 aa7.31□□□□□ -1.24
CLNS1A-207ENST00000527133 HIGD2AQ9BW72 106 aa7.31□□□□□ -1.24
CLNS1A-207ENST00000527133 M0R378 163 aa7.3□□□□□ -1.24
CLNS1A-207ENST00000527133 DAND5Q8N907 189 aa7.3□□□□□ -1.24
CLNS1A-207ENST00000527133 SNAPINO95295 136 aa7.29□□□□□ -1.24
CLNS1A-207ENST00000527133 VPREB1P12018 145 aa7.29□□□□□ -1.24
CLNS1A-207ENST00000527133 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
CLNS1A-207ENST00000527133 Q8NBF4 154 aa7.29□□□□□ -1.24
CLNS1A-207ENST00000527133 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
CLNS1A-207ENST00000527133 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 K7EMI3 77 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 SPINK8P0C7L1 97 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 PFN2P35080 140 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 TIMM17AQ99595 171 aa7.28□□□□□ -1.24
CLNS1A-207ENST00000527133 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
CLNS1A-207ENST00000527133 ATP5LO75964 103 aa7.27□□□□□ -1.25
CLNS1A-207ENST00000527133 IGLV5-45A0A087WSX0 123 aa7.26□□□□□ -1.25
CLNS1A-207ENST00000527133 TOMM6Q96B49 74 aa7.26□□□□□ -1.25
CLNS1A-207ENST00000527133 SND1-IT1Q9HBX3 110 aa7.26□□□□□ -1.25
CLNS1A-207ENST00000527133 NXT2Q9NPJ8 142 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms