RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
SSSCA1-203ENST00000526877 UQCR10Q9UDW1 63 aa8.4□□□□□ -1.06
SSSCA1-203ENST00000526877 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 DLEU1O43261 78 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 Q8IZM0 81 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
SSSCA1-203ENST00000526877 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
SSSCA1-203ENST00000526877 MAPKAPK5-AS1Q8N8E1 139 aa8.38□□□□□ -1.07
SSSCA1-203ENST00000526877 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
SSSCA1-203ENST00000526877 ABCA13Q86UQ4 5058 aa8.38□□□□□ -1.07
SSSCA1-203ENST00000526877 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 NDUFA1O15239 70 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 CKS1BP61024 79 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
SSSCA1-203ENST00000526877 CXCL5P42830 114 aa8.36□□□□□ -1.07
SSSCA1-203ENST00000526877 HERV-K104P63124 156 aa8.36□□□□□ -1.07
SSSCA1-203ENST00000526877 SCGB1D4Q6XE38 83 aa8.36□□□□□ -1.07
SSSCA1-203ENST00000526877 USP17L23D6RBM5 183 aa8.35□□□□□ -1.07
SSSCA1-203ENST00000526877 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
SSSCA1-203ENST00000526877 C15orf56Q8N910 161 aa8.35□□□□□ -1.07
SSSCA1-203ENST00000526877 HSPG2P98160 4391 aa8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 F8WDY8 70 aa8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 ZNF625Q96I27 306 aaPredicted RBP8.34□□□□□ -1.07
SSSCA1-203ENST00000526877 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
SSSCA1-203ENST00000526877 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
SSSCA1-203ENST00000526877 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
SSSCA1-203ENST00000526877 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
SSSCA1-203ENST00000526877 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
SSSCA1-203ENST00000526877 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 CAMK2N2Q96S95 79 aa8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
SSSCA1-203ENST00000526877 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 LECT2O14960 151 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 DDTP30046 118 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 C2orf91Q6ZV80 131 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 LINC00526Q96FQ7 95 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
SSSCA1-203ENST00000526877 A0A087WTM6 91 aa8.3□□□□□ -1.08
SSSCA1-203ENST00000526877 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
SSSCA1-203ENST00000526877 TIMM17BO60830 172 aa8.3□□□□□ -1.08
SSSCA1-203ENST00000526877 FUSP35637 526 aaKnown RBP eCLIP8.3□□□□□ -1.08
SSSCA1-203ENST00000526877 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
SSSCA1-203ENST00000526877 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
SSSCA1-203ENST00000526877 TRBV30A0A0K0K1B3 111 aa8.28□□□□□ -1.08
SSSCA1-203ENST00000526877 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSSCA1-203ENST00000526877 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
SSSCA1-203ENST00000526877 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 EREGO14944 169 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 LINC00158P58513 81 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 CTAG1AP78358 180 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 COX17Q14061 63 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 WFDC2Q14508 124 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 Q6ZRU5 148 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 Q6ZVH6 145 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 Q8N1X5 172 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 HIST1H4GQ99525 98 aa8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
SSSCA1-203ENST00000526877 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 PFN2P35080 140 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 HSD52Q0P140 79 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 TAL2Q16559 108 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
SSSCA1-203ENST00000526877 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 GCSHP23434 173 aa8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 RNF151Q2KHN1 245 aa8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 LITAFQ99732 161 aa8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
SSSCA1-203ENST00000526877 XGP55808 180 aa8.24□□□□□ -1.09
SSSCA1-203ENST00000526877 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
SSSCA1-203ENST00000526877 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
SSSCA1-203ENST00000526877 ADAMTSL4-AS1Q5T5F5 129 aa8.24□□□□□ -1.09
SSSCA1-203ENST00000526877 COPS9Q8WXC6 57 aa8.24□□□□□ -1.09
SSSCA1-203ENST00000526877 SLPIP03973 132 aa8.23□□□□□ -1.09
SSSCA1-203ENST00000526877 IFITM1P13164 125 aa8.23□□□□□ -1.09
SSSCA1-203ENST00000526877 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
SSSCA1-203ENST00000526877 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
SSSCA1-203ENST00000526877 Q8N814 137 aa8.23□□□□□ -1.09
SSSCA1-203ENST00000526877 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
SSSCA1-203ENST00000526877 M0R143 59 aa8.22□□□□□ -1.09
SSSCA1-203ENST00000526877 DAND5Q8N907 189 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms