RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CXCL5P42830 114 aa6.57□□□□□ -1.36
RBBP4-216ENST00000525506 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
RBBP4-216ENST00000525506 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
RBBP4-216ENST00000525506 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
RBBP4-216ENST00000525506 LINC00469Q8N7U9 141 aa6.56□□□□□ -1.36
RBBP4-216ENST00000525506 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
RBBP4-216ENST00000525506 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
RBBP4-216ENST00000525506 C6orf48Q9UBA6 75 aa6.56□□□□□ -1.36
RBBP4-216ENST00000525506 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
RBBP4-216ENST00000525506 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 ODF1Q14990 250 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
RBBP4-216ENST00000525506 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 F8VRH5 84 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 H3BRM9 83 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 CKS1BP61024 79 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
RBBP4-216ENST00000525506 TRGC2P03986 189 aa6.53□□□□□ -1.36
RBBP4-216ENST00000525506 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
RBBP4-216ENST00000525506 Q6ZRP5 223 aa6.53□□□□□ -1.36
RBBP4-216ENST00000525506 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 COLCA2A8K830 154 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 HSBP1O75506 76 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 PRR3P79522 188 aaKnown RBP6.52□□□□□ -1.37
RBBP4-216ENST00000525506 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
RBBP4-216ENST00000525506 SERTAD4-AS1Q5TG53 156 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 TOMM7Q9P0U1 55 aa6.52□□□□□ -1.37
RBBP4-216ENST00000525506 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
RBBP4-216ENST00000525506 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
RBBP4-216ENST00000525506 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
RBBP4-216ENST00000525506 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
RBBP4-216ENST00000525506 ZNF22P17026 224 aaPredicted RBP6.5□□□□□ -1.37
RBBP4-216ENST00000525506 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
RBBP4-216ENST00000525506 SPINK8P0C7L1 97 aa6.49□□□□□ -1.37
RBBP4-216ENST00000525506 NDUFA6P56556 154 aa6.49□□□□□ -1.37
RBBP4-216ENST00000525506 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
RBBP4-216ENST00000525506 C11orf86A6NJI1 115 aa6.48□□□□□ -1.37
RBBP4-216ENST00000525506 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
RBBP4-216ENST00000525506 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
RBBP4-216ENST00000525506 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
RBBP4-216ENST00000525506 TNXBP22105 4242 aa6.47□□□□□ -1.37
RBBP4-216ENST00000525506 SERF1AO75920 110 aa6.47□□□□□ -1.37
RBBP4-216ENST00000525506 LINC00310P59036 64 aa6.47□□□□□ -1.37
RBBP4-216ENST00000525506 C9orf129Q5T035 196 aaKnown RBP6.47□□□□□ -1.37
RBBP4-216ENST00000525506 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.37
RBBP4-216ENST00000525506 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
RBBP4-216ENST00000525506 COX17Q14061 63 aa6.46□□□□□ -1.38
RBBP4-216ENST00000525506 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
RBBP4-216ENST00000525506 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
RBBP4-216ENST00000525506 HSPB8Q9UJY1 196 aa6.46□□□□□ -1.38
RBBP4-216ENST00000525506 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
RBBP4-216ENST00000525506 M0QXV9 152 aa6.45□□□□□ -1.38
RBBP4-216ENST00000525506 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
RBBP4-216ENST00000525506 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
RBBP4-216ENST00000525506 TP73-AS1Q9UF72 201 aa6.45□□□□□ -1.38
RBBP4-216ENST00000525506 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
RBBP4-216ENST00000525506 PLNP26678 52 aa6.44□□□□□ -1.38
RBBP4-216ENST00000525506 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
RBBP4-216ENST00000525506 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
RBBP4-216ENST00000525506 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
RBBP4-216ENST00000525506 LINC01600Q96MT4 127 aa6.44□□□□□ -1.38
RBBP4-216ENST00000525506 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
RBBP4-216ENST00000525506 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
RBBP4-216ENST00000525506 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
RBBP4-216ENST00000525506 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 SCO1O75880 301 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 ERG28Q9UKR5 140 aa6.42□□□□□ -1.38
RBBP4-216ENST00000525506 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
RBBP4-216ENST00000525506 NUPR1O60356 82 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 HERV-K104P63124 156 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 UBE2BP63146 152 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
RBBP4-216ENST00000525506 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
RBBP4-216ENST00000525506 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 MAP1LC3CQ9BXW4 147 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
RBBP4-216ENST00000525506 LINC00587B1AMM8 73 aa6.39□□□□□ -1.39
RBBP4-216ENST00000525506 DPM2O94777 84 aa6.39□□□□□ -1.39
RBBP4-216ENST00000525506 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
RBBP4-216ENST00000525506 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
RBBP4-216ENST00000525506 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms