RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ZNF25P17030 456 aaPredicted RBP3.3□□□□□ -1.88
NEDD8-203ENST00000524927 OR10D4PQ8NGN7 298 aa3.3□□□□□ -1.88
NEDD8-203ENST00000524927 V9GYY9 64 aa3.3□□□□□ -1.88
NEDD8-203ENST00000524927 OR7C2O60412 319 aa3.29□□□□□ -1.88
NEDD8-203ENST00000524927 TMBIM6P55061 237 aa3.29□□□□□ -1.88
NEDD8-203ENST00000524927 UBE2L3P68036 154 aaKnown RBP3.29□□□□□ -1.88
NEDD8-203ENST00000524927 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
NEDD8-203ENST00000524927 SNX29P2Q8IUI4 249 aa3.29□□□□□ -1.88
NEDD8-203ENST00000524927 SMIM31A0A1B0GVY4 71 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 GRIFINA4D1Z8 144 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 M0QY20 66 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 SSSCA1O60232 199 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 PSMB2P49721 201 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 TAS2R30P59541 319 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 RGS21Q2M5E4 152 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 SPANXA2-OT1Q8N9U9 137 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 AP3S1Q92572 193 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 BTF3L4Q96K17 158 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 MAP1LC3CQ9BXW4 147 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 GNB1LQ9BYB4 327 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 VCX3AQ9NNX9 186 aa3.28□□□□□ -1.88
NEDD8-203ENST00000524927 ANKRD20A5PA0PJZ0 165 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 OR5AL1P0C617 328 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 NKX2-5P52952 324 aaPredicted RBP3.27□□□□□ -1.89
NEDD8-203ENST00000524927 GNGT1P63211 74 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 PPP1R1AQ13522 171 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 TAL2Q16559 108 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 UNQ6190/PRO20217Q6UXQ8 127 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 TMEM229BQ8NBD8 167 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
NEDD8-203ENST00000524927 TPRKBQ9Y3C4 175 aa3.27□□□□□ -1.89
NEDD8-203ENST00000524927 IGHV6-1A0A0B4J1U7 121 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 FAM240AA0A1B0GVK7 77 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 A8MWL6 223 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 C1orf196B1AJZ1 125 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 NDUFS5O43920 106 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 ST20-AS1Q8NBB2 130 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 ALG5Q9Y673 324 aa3.26□□□□□ -1.89
NEDD8-203ENST00000524927 A8MUU9 505 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 DISC1C4P0D8 188 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 GATCO43716 136 aaKnown RBP3.25□□□□□ -1.89
NEDD8-203ENST00000524927 SMIM17P0DL12 118 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 UBE2G2P60604 165 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 RAB14P61106 215 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 GNG5P63218 68 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 PRLHP81277 87 aa3.25□□□□□ -1.89
NEDD8-203ENST00000524927 FLI1Q01543 452 aaPredicted RBP3.25□□□□□ -1.89
NEDD8-203ENST00000524927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
NEDD8-203ENST00000524927 TRBV30A0A0K0K1B3 111 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 IGKV2-29A2NJV5 120 aaPredicted RBP3.24□□□□□ -1.89
NEDD8-203ENST00000524927 BAXQ07812 192 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 C5orf38Q86SI9 138 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 AKAP14Q86UN6 197 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 MIR7-3HGQ8N6C7 128 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 OR10AG1Q8NH19 301 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 ORAOV1Q8WV07 137 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 PRRT1Q99946 306 aa3.24□□□□□ -1.89
NEDD8-203ENST00000524927 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 K7EN84 100 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 NCR2O95944 276 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 TGFBR1P36897 503 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 S100A12P80511 92 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 PMVKQ15126 192 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 RASL11AQ6T310 242 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 PACRGLQ8N7B6 248 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 CCDC32Q9BV29 185 aa3.23□□□□□ -1.89
NEDD8-203ENST00000524927 ZNF706Q9Y5V0 76 aaPredicted RBP3.23□□□□□ -1.89
NEDD8-203ENST00000524927 UBE2L5PA0A1B0GUS4 154 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 RAB19A4D1S5 217 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 KHDC3LQ587J8 217 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 FAM231DQ6ZW35 169 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 NIT2Q9NQR4 276 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 CDC42SE2Q9NRR3 84 aa3.22□□□□□ -1.89
NEDD8-203ENST00000524927 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 CEBPGP53567 150 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 VAMP3Q15836 100 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 FAM19A1Q7Z5A9 133 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 C5orf17Q8NAS9 161 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 AP1S3Q96PC3 154 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 NPCDR1Q9BY65 106 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 GSKIPQ9P0R6 139 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
NEDD8-203ENST00000524927 TMSB15BA0A087X1C1 80 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 TCAPO15273 167 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 CST7O76096 145 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 S100A1P23297 94 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 CRIP1P50238 77 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 TAS2R45P59539 299 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 SSBP1Q04837 148 aaKnown RBP3.2□□□□□ -1.9
NEDD8-203ENST00000524927 TMEM128Q5BJH2 165 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 SPANXN1Q5VSR9 72 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 MRPS26Q9BYN8 205 aaKnown RBP3.2□□□□□ -1.9
NEDD8-203ENST00000524927 XAGE1AQ9HD64 81 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 ARL2-SNX15V9GYD0 113 aa3.2□□□□□ -1.9
NEDD8-203ENST00000524927 SH2D1AO60880 128 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms