RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
HMBOX1-210ENST00000523613 HINT1P49773 126 aaPredicted RBP9.97□□□□□ -0.81
HMBOX1-210ENST00000523613 CIRBPQ14011 172 aaKnown RBP9.97□□□□□ -0.81
HMBOX1-210ENST00000523613 MEIG1Q5JSS6 88 aa9.97□□□□□ -0.81
HMBOX1-210ENST00000523613 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.81
HMBOX1-210ENST00000523613 Q6ZR54 194 aa9.96□□□□□ -0.81
HMBOX1-210ENST00000523613 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.81
HMBOX1-210ENST00000523613 TIMM17BO60830 172 aa9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 HSD52Q0P140 79 aa9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 HIST1H4GQ99525 98 aa9.96□□□□□ -0.82
HMBOX1-210ENST00000523613 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMBOX1-210ENST00000523613 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-210ENST00000523613 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-210ENST00000523613 TAL2Q16559 108 aa9.94□□□□□ -0.82
HMBOX1-210ENST00000523613 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
HMBOX1-210ENST00000523613 CAMK2N2Q96S95 79 aa9.94□□□□□ -0.82
HMBOX1-210ENST00000523613 F8WDY8 70 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 COL5A1-AS1Q5SY13 56 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 LECT2O14960 151 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 BATFQ16520 125 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 LITAFQ99732 161 aa9.93□□□□□ -0.82
HMBOX1-210ENST00000523613 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
HMBOX1-210ENST00000523613 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
HMBOX1-210ENST00000523613 Q6ZRN7 208 aaPredicted RBP9.92□□□□□ -0.82
HMBOX1-210ENST00000523613 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
HMBOX1-210ENST00000523613 PFN2P35080 140 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 LINC00158P58513 81 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 SPANXCQ9NY87 97 aa9.91□□□□□ -0.82
HMBOX1-210ENST00000523613 A0A1B0GV90 55 aa9.9□□□□□ -0.82
HMBOX1-210ENST00000523613 GCSHP23434 173 aa9.9□□□□□ -0.82
HMBOX1-210ENST00000523613 C14orf177Q52M58 125 aa9.9□□□□□ -0.82
HMBOX1-210ENST00000523613 C1orf134Q5TEV5 83 aa9.9□□□□□ -0.82
HMBOX1-210ENST00000523613 Q6ZVH6 145 aa9.9□□□□□ -0.82
HMBOX1-210ENST00000523613 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.83
HMBOX1-210ENST00000523613 SYCNQ0VAF6 134 aa9.9□□□□□ -0.83
HMBOX1-210ENST00000523613 CEND1Q8N111 149 aa9.9□□□□□ -0.83
HMBOX1-210ENST00000523613 LYSTQ99698 3801 aa9.89□□□□□ -0.83
HMBOX1-210ENST00000523613 COX17Q14061 63 aa9.89□□□□□ -0.83
HMBOX1-210ENST00000523613 WFDC2Q14508 124 aa9.89□□□□□ -0.83
HMBOX1-210ENST00000523613 Q6ZRU5 148 aa9.89□□□□□ -0.83
HMBOX1-210ENST00000523613 DAND5Q8N907 189 aa9.89□□□□□ -0.83
HMBOX1-210ENST00000523613 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
HMBOX1-210ENST00000523613 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 COPS9Q8WXC6 57 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 IFITM1P13164 125 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 PTTG1IPP53801 180 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 MIR7-3HGQ8N6C7 128 aa9.87□□□□□ -0.83
HMBOX1-210ENST00000523613 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
HMBOX1-210ENST00000523613 FXYD2P54710 66 aa9.86□□□□□ -0.83
HMBOX1-210ENST00000523613 NPC2P61916 151 aa9.86□□□□□ -0.83
HMBOX1-210ENST00000523613 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
HMBOX1-210ENST00000523613 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
HMBOX1-210ENST00000523613 DNAH1Q9P2D7 4330 aa9.85□□□□□ -0.83
HMBOX1-210ENST00000523613 TMEM238LA0A1B0GVL6 79 aa9.85□□□□□ -0.83
HMBOX1-210ENST00000523613 A6NJY4 79 aa9.85□□□□□ -0.83
HMBOX1-210ENST00000523613 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
HMBOX1-210ENST00000523613 LCE6AA0A183 80 aa9.84□□□□□ -0.83
HMBOX1-210ENST00000523613 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
HMBOX1-210ENST00000523613 SLPIP03973 132 aa9.83□□□□□ -0.84
HMBOX1-210ENST00000523613 ALMS1Q8TCU4 4167 aa9.83□□□□□ -0.84
HMBOX1-210ENST00000523613 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 A6NDN8 102 aa9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 A0A087WTM6 91 aa9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 CNBPP62633 177 aaKnown RBP9.82□□□□□ -0.84
HMBOX1-210ENST00000523613 A4D1N5 150 aa9.81□□□□□ -0.84
HMBOX1-210ENST00000523613 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
HMBOX1-210ENST00000523613 SOSTDC1Q6X4U4 206 aa9.81□□□□□ -0.84
HMBOX1-210ENST00000523613 PPDPFQ9H3Y8 114 aa9.81□□□□□ -0.84
HMBOX1-210ENST00000523613 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
HMBOX1-210ENST00000523613 Q8N814 137 aa9.8□□□□□ -0.84
HMBOX1-210ENST00000523613 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
HMBOX1-210ENST00000523613 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
HMBOX1-210ENST00000523613 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
HMBOX1-210ENST00000523613 LOC107984156A0A0G2JMH3 177 aa9.77□□□□□ -0.85
HMBOX1-210ENST00000523613 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
HMBOX1-210ENST00000523613 RPL18AQ02543 176 aaKnown RBP9.77□□□□□ -0.85
HMBOX1-210ENST00000523613 ARL17AQ8IVW1 177 aa9.77□□□□□ -0.85
HMBOX1-210ENST00000523613 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 Q6ZRP5 223 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 RTL8CO15255 209 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 CFC1P0CG37 223 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
HMBOX1-210ENST00000523613 K7ERJ3 54 aa9.75□□□□□ -0.85
HMBOX1-210ENST00000523613 RAB37Q96AX2 223 aa9.75□□□□□ -0.85
HMBOX1-210ENST00000523613 A0A0B4J2C4 111 aa9.74□□□□□ -0.85
HMBOX1-210ENST00000523613 TNP2Q05952 138 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms