RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 FAM223BA6NKX1 122 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 NDUFC1O43677 76 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 BCE1O60756 84 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 ACYP1P07311 99 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 PIPP12273 146 aaPredicted RBP0.85□□□□□ -2.27
CPNE3-207ENST00000523588 GCHFRP30047 84 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 UBE2D3P61077 147 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 UBE2D2P62837 147 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 ARHGEF5Q12774 1597 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 SPANXN1Q5VSR9 72 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 NCBP2-AS2Q69YL0 99 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 C6orf201Q7Z4U5 140 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 VMO1Q7Z5L0 202 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 TMEM141Q96I45 108 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 BPESC1Q9GZL8 116 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 TNS1Q9HBL0 1735 aaKnown RBP0.85□□□□□ -2.27
CPNE3-207ENST00000523588 FMN2Q9NZ56 1722 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 MAST1Q9Y2H9 1570 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 KIAA0100Q14667 2235 aaKnown RBP0.85□□□□□ -2.27
CPNE3-207ENST00000523588 LOC285556D6RIA3 1793 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 MUC22E2RYF6 1773 aaPredicted RBP0.85□□□□□ -2.27
CPNE3-207ENST00000523588 PAPPAQ13219 1627 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 USP32Q8NFA0 1604 aa0.85□□□□□ -2.27
CPNE3-207ENST00000523588 CICQ96RK0 1608 aaPredicted RBP0.85□□□□□ -2.27
CPNE3-207ENST00000523588 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 MYMXA0A1B0GTQ4 84 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 IQCF6A8MYZ5 107 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 HCG22E2RYF7 251 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 ZNF137PP52743 207 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 SMIM11AP58511 58 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 KLKP1Q107X0 134 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 C9orf116Q5BN46 136 aaPredicted RBP0.84□□□□□ -2.27
CPNE3-207ENST00000523588 Q5VV11 94 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 SLC48A1Q6P1K1 146 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 MYO7BQ6PIF6 2116 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 SFTA2Q6UW10 78 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 DEFB132Q7Z7B7 95 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 DYNLRB2Q8TF09 96 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 SMIM4Q8WVI0 70 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 PPP1R1CQ8WVI7 109 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 NMES1Q9C002 83 aa0.84□□□□□ -2.27
CPNE3-207ENST00000523588 KIF21BO75037 1637 aa0.84□□□□□ -2.28
CPNE3-207ENST00000523588 CD163L1Q9NR16 1453 aa0.84□□□□□ -2.28
CPNE3-207ENST00000523588 IQGAP1P46940 1657 aa0.84□□□□□ -2.28
CPNE3-207ENST00000523588 TULP4Q9NRJ4 1543 aa0.84□□□□□ -2.28
CPNE3-207ENST00000523588 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.28
CPNE3-207ENST00000523588 PI4KAP42356 2102 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 TRAV22A0A0B4J277 110 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 TRBV10-3A0A0K0K1G6 114 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 TEX49A0A1B0GTD5 131 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 A0A1B0GWA3 101 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 C10orf142B7Z368 130 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 F8WEM9 126 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 H3BVH4 76 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 TFF1P04155 84 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 HMGN2P05204 90 aaKnown RBP0.83□□□□□ -2.28
CPNE3-207ENST00000523588 S100A3P33764 101 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 SSBP1Q04837 148 aaKnown RBP0.83□□□□□ -2.28
CPNE3-207ENST00000523588 PSMG4Q5JS54 123 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 Q6JHZ5 121 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 NDUFA11Q86Y39 141 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 C20orf197Q8N268 126 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 SPTSSBQ8NFR3 76 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 IFI27L1Q96BM0 104 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 FAM167A-AS1Q96KT0 104 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 CYP4F30PQ9H0H9 118 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 DYNLRB1Q9NP97 96 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 CMC2Q9NRP2 79 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 PSENENQ9NZ42 101 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 GNG13Q9P2W3 67 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 MRC1P22897 1456 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 GCC2Q8IWJ2 1684 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 FAM208AQ9UK61 1670 aaKnown RBP0.83□□□□□ -2.28
CPNE3-207ENST00000523588 CPS1P31327 1500 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 ATP7AQ04656 1500 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 PAPPA2Q9BXP8 1791 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 ABCC8Q09428 1581 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 DNAJC13O75165 2243 aa0.83□□□□□ -2.28
CPNE3-207ENST00000523588 LRP5O75197 1615 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 C3P01024 1663 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 RREB1Q92766 1687 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 ZDBF2Q9HCK1 2354 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 LY75O60449 1722 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 QSER1Q2KHR3 1735 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 PARP4Q9UKK3 1724 aaKnown RBP0.82□□□□□ -2.28
CPNE3-207ENST00000523588 TRBV7-3A0A075B6L6 115 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 PIGBOS1A0A0B4J2F0 54 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 TMEM30CPA0ZSE6 113 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 A6NIN4 97 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 CEBPZOSA8MTT3 80 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 TMEM14DPA8MWL7 114 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 LEPROTL1O95214 131 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 PRH1P02810 166 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 IFI27P40305 119 aaPredicted RBP0.82□□□□□ -2.28
CPNE3-207ENST00000523588 UBE2D1P51668 147 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 PLGLAQ15195 96 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 MRPL36Q9P0J6 103 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms