RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 IGHV3-30-5P0DP03 117 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 CCL3L1P16619 93 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 SPINT3P49223 89 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 SSBP1Q04837 148 aaKnown RBP0.97□□□□□ -2.25
PCM1-219ENST00000523540 SPAG11BQ08648 103 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 ATP5EP2Q5VTU8 51 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 Q6JHZ5 121 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 SPAG11AQ6PDA7 123 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 Q86TA4 180 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 PRR15LQ9BU68 103 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 ARL2-SNX15V9GYD0 113 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 MYO7AQ13402 2215 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 RICTORQ6R327 1708 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 MED12Q93074 2177 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 C3P01024 1663 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 NHSL1Q5SYE7 1610 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 BIVM-ERCC5R4GMW8 1640 aa0.97□□□□□ -2.25
PCM1-219ENST00000523540 UNC13CQ8NB66 2214 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 POLR1AO95602 1720 aaPredicted RBP0.96□□□□□ -2.26
PCM1-219ENST00000523540 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 LEPROTL1O95214 131 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 IGLV3-1P01715 115 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 PDE6GP18545 87 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 IFI27P40305 119 aaPredicted RBP0.96□□□□□ -2.26
PCM1-219ENST00000523540 FAM74A4Q5TZK3 123 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 BAGE3Q86Y29 109 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 BAGE2Q86Y30 109 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 COX7B2Q8TF08 81 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 AMELXQ99217 191 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 PROK2Q9HC23 129 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 GNG13Q9P2W3 67 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 CD163L1Q9NR16 1453 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 ABCA5Q8WWZ7 1642 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 PHRF1Q9P1Y6 1649 aaKnown RBP0.96□□□□□ -2.26
PCM1-219ENST00000523540 SPAG17Q6Q759 2223 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 TECTAO75443 2155 aa0.96□□□□□ -2.26
PCM1-219ENST00000523540 NRAPQ86VF7 1730 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 ZNF831Q5JPB2 1677 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 ATP7BP35670 1465 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 FXYD6-FXYD2A0A087WZ82 144 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 C10orf142B7Z368 130 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 D6R8Y8 96 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 F8VRH5 84 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 H3BVH4 76 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 CCL18P55774 89 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 RPL37AP61513 92 aaKnown RBP0.95□□□□□ -2.26
PCM1-219ENST00000523540 C10orf55Q5SWW7 151 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 MUSTN1Q8IVN3 82 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 FXYD6Q9H0Q3 95 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 WFDC10AQ9H1F0 79 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 KLK9Q9UKQ9 250 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 UBE2D4Q9Y2X8 147 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 R4GMQ9 66 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 LRP6O75581 1613 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 IQGAP2Q13576 1575 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 LY75O60449 1722 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 TJP1Q07157 1748 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 CDC42BPAQ5VT25 1732 aa0.95□□□□□ -2.26
PCM1-219ENST00000523540 KIAA0586Q9BVV6 1533 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 CACNA1BQ00975 2339 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 NRXN3Q9Y4C0 1643 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 PAPPA2Q9BXP8 1791 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 A0A087WVE0 104 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 A0A0D9SFI3 127 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 SNRPGP15A8MWD9 76 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 RNASE3P12724 160 aaKnown RBP0.94□□□□□ -2.26
PCM1-219ENST00000523540 FDCSPQ8NFU4 85 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 PPP1R1CQ8WVI7 109 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 FAM103A1Q9BTL3 118 aaKnown RBP0.94□□□□□ -2.26
PCM1-219ENST00000523540 V9GYV3 84 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 ABCC6O95255 1503 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 FAM208AQ9UK61 1670 aaKnown RBP0.94□□□□□ -2.26
PCM1-219ENST00000523540 ABCA4P78363 2273 aa0.94□□□□□ -2.26
PCM1-219ENST00000523540 DDX60LQ5H9U9 1706 aaKnown RBP0.93□□□□□ -2.26
PCM1-219ENST00000523540 SAMD9Q5K651 1589 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 ERCC6L2Q5T890 1561 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 TRBV7-4A0A0J9YYF1 115 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 NBDYA0A0U1RRE5 68 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 CTXND1A0A1B0GTU2 59 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 M0R3E3 92 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 UQCR11O14957 56 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 MGPP08493 103 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 FXYD3Q14802 87 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 ATXN8Q156A1 80 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 DEFB132Q7Z7B7 95 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 TMEM14CQ9P0S9 112 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 SNURFQ9Y675 71 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 LINC01558Q9Y6Z2 57 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 ZNF469Q96JG9 3925 aaPredicted RBP0.93□□□□□ -2.26
PCM1-219ENST00000523540 CPS1P31327 1500 aa0.93□□□□□ -2.26
PCM1-219ENST00000523540 DOT1LQ8TEK3 1739 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 DNAJC13O75165 2243 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 ANKRD50Q9ULJ7 1429 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 A0A087WTM6 91 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 A0A1B0GUT8 65 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 M0R135 149 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 S100A3P33764 101 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 COX17Q14061 63 aa0.92□□□□□ -2.26
PCM1-219ENST00000523540 LINC00322Q6ZN03 302 aaPredicted RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms