RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 B5MCH6 92 aa12.38□□□□□ -0.43
IKBKB-228ENST00000523517 DNAL4O96015 105 aa12.38□□□□□ -0.43
IKBKB-228ENST00000523517 LINC00643Q86TS7 51 aa12.38□□□□□ -0.43
IKBKB-228ENST00000523517 PDZD2O15018 2839 aa12.37□□□□□ -0.43
IKBKB-228ENST00000523517 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
IKBKB-228ENST00000523517 Q8IZM0 81 aa12.37□□□□□ -0.43
IKBKB-228ENST00000523517 A0A096LPF7 62 aa12.36□□□□□ -0.43
IKBKB-228ENST00000523517 CLPSL2Q6UWE3 100 aa12.36□□□□□ -0.43
IKBKB-228ENST00000523517 IMUPQ9GZP8 106 aa12.36□□□□□ -0.43
IKBKB-228ENST00000523517 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
IKBKB-228ENST00000523517 LINC01561Q8N1V8 128 aa12.35□□□□□ -0.43
IKBKB-228ENST00000523517 ACANP16112 2415 aa12.35□□□□□ -0.43
IKBKB-228ENST00000523517 ATP5G1P05496 136 aa12.34□□□□□ -0.43
IKBKB-228ENST00000523517 GAGE2AQ6NT46 116 aa12.34□□□□□ -0.43
IKBKB-228ENST00000523517 LY6G6DO95868 133 aa12.34□□□□□ -0.43
IKBKB-228ENST00000523517 SMR3AQ99954 134 aa12.34□□□□□ -0.43
IKBKB-228ENST00000523517 SS18L2Q9UHA2 77 aa12.33□□□□□ -0.44
IKBKB-228ENST00000523517 MTORP42345 2549 aa12.33□□□□□ -0.44
IKBKB-228ENST00000523517 LECT2O14960 151 aa12.33□□□□□ -0.44
IKBKB-228ENST00000523517 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
IKBKB-228ENST00000523517 TENM4Q6N022 2769 aa12.31□□□□□ -0.44
IKBKB-228ENST00000523517 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
IKBKB-228ENST00000523517 LINC00269Q8N2A0 174 aa12.3□□□□□ -0.44
IKBKB-228ENST00000523517 OBSCN-AS1Q96MR7 158 aa12.3□□□□□ -0.44
IKBKB-228ENST00000523517 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
IKBKB-228ENST00000523517 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
IKBKB-228ENST00000523517 FAM236AA0A1B0GUQ0 79 aa12.29□□□□□ -0.44
IKBKB-228ENST00000523517 FAM236BA0A1B0GV22 79 aa12.29□□□□□ -0.44
IKBKB-228ENST00000523517 KIAA0087Q14695 138 aa12.29□□□□□ -0.44
IKBKB-228ENST00000523517 DEFB4AO15263 64 aa12.28□□□□□ -0.44
IKBKB-228ENST00000523517 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
IKBKB-228ENST00000523517 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
IKBKB-228ENST00000523517 C9orf66Q5T8R8 295 aa12.27□□□□□ -0.44
IKBKB-228ENST00000523517 SLPIP03973 132 aa12.27□□□□□ -0.45
IKBKB-228ENST00000523517 DEFB135Q30KP9 77 aa12.27□□□□□ -0.45
IKBKB-228ENST00000523517 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
IKBKB-228ENST00000523517 J3QKU1 62 aa12.26□□□□□ -0.45
IKBKB-228ENST00000523517 Q8N3U1 123 aa12.26□□□□□ -0.45
IKBKB-228ENST00000523517 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
IKBKB-228ENST00000523517 CXCL5P42830 114 aa12.26□□□□□ -0.45
IKBKB-228ENST00000523517 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
IKBKB-228ENST00000523517 COX17Q14061 63 aa12.26□□□□□ -0.45
IKBKB-228ENST00000523517 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
IKBKB-228ENST00000523517 NANOS2P60321 138 aaKnown RBP12.25□□□□□ -0.45
IKBKB-228ENST00000523517 REG3AQ06141 175 aa12.25□□□□□ -0.45
IKBKB-228ENST00000523517 KLK5Q9Y337 293 aaPredicted RBP12.25□□□□□ -0.45
IKBKB-228ENST00000523517 NDUFC2O95298 119 aa12.25□□□□□ -0.45
IKBKB-228ENST00000523517 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
IKBKB-228ENST00000523517 ORMDL1Q9P0S3 153 aa12.24□□□□□ -0.45
IKBKB-228ENST00000523517 NCR3O14931 201 aa12.23□□□□□ -0.45
IKBKB-228ENST00000523517 DAD1P61803 113 aa12.23□□□□□ -0.45
IKBKB-228ENST00000523517 APOC4P55056 127 aa12.22□□□□□ -0.45
IKBKB-228ENST00000523517 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
IKBKB-228ENST00000523517 LINC00167Q96N53 147 aa12.22□□□□□ -0.45
IKBKB-228ENST00000523517 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.46
IKBKB-228ENST00000523517 TMEM126AQ9H061 195 aa12.21□□□□□ -0.46
IKBKB-228ENST00000523517 A0A1B0GX51 115 aa12.2□□□□□ -0.46
IKBKB-228ENST00000523517 CELA1Q9UNI1 258 aa12.2□□□□□ -0.46
IKBKB-228ENST00000523517 Q8N814 137 aa12.19□□□□□ -0.46
IKBKB-228ENST00000523517 LINC00846Q9NV44 126 aa12.19□□□□□ -0.46
IKBKB-228ENST00000523517 HIVEP2P31629 2446 aa12.19□□□□□ -0.46
IKBKB-228ENST00000523517 ITPR2Q14571 2701 aa12.19□□□□□ -0.46
IKBKB-228ENST00000523517 Q8NAQ8 132 aa12.18□□□□□ -0.46
IKBKB-228ENST00000523517 MIFP14174 115 aa12.16□□□□□ -0.46
IKBKB-228ENST00000523517 Q8NDZ9 215 aa12.16□□□□□ -0.46
IKBKB-228ENST00000523517 NBEAL2Q6ZNJ1 2754 aa12.15□□□□□ -0.46
IKBKB-228ENST00000523517 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
IKBKB-228ENST00000523517 LELP1Q5T871 98 aa12.15□□□□□ -0.46
IKBKB-228ENST00000523517 Q6JHZ5 121 aa12.15□□□□□ -0.46
IKBKB-228ENST00000523517 UNC79Q9P2D8 2635 aa12.15□□□□□ -0.47
IKBKB-228ENST00000523517 SPART-AS1P0CW21 52 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 HTN3P15516 51 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 CCKP06307 115 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
IKBKB-228ENST00000523517 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
IKBKB-228ENST00000523517 HIST1H4AP62805 103 aaKnown RBP12.13□□□□□ -0.47
IKBKB-228ENST00000523517 C6orf99Q4VX62 202 aa12.13□□□□□ -0.47
IKBKB-228ENST00000523517 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
IKBKB-228ENST00000523517 JMJD7-PLA2G4BH0Y9G9 81 aa12.13□□□□□ -0.47
IKBKB-228ENST00000523517 C3orf22Q8N5N4 141 aa12.13□□□□□ -0.47
IKBKB-228ENST00000523517 INAFM1C9JVW0 142 aa12.12□□□□□ -0.47
IKBKB-228ENST00000523517 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
IKBKB-228ENST00000523517 MUC7Q8TAX7 377 aa12.11□□□□□ -0.47
IKBKB-228ENST00000523517 UQCRQO14949 82 aa12.11□□□□□ -0.47
IKBKB-228ENST00000523517 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
IKBKB-228ENST00000523517 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
IKBKB-228ENST00000523517 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
IKBKB-228ENST00000523517 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
IKBKB-228ENST00000523517 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
IKBKB-228ENST00000523517 LINC00526Q96FQ7 95 aa12.1□□□□□ -0.47
IKBKB-228ENST00000523517 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
IKBKB-228ENST00000523517 C9orf153Q5TBE3 101 aa12.08□□□□□ -0.47
IKBKB-228ENST00000523517 LINC00575Q6W349 94 aa12.08□□□□□ -0.47
IKBKB-228ENST00000523517 FASNP49327 2511 aaKnown RBP12.08□□□□□ -0.48
IKBKB-228ENST00000523517 VWFP04275 2813 aa12.08□□□□□ -0.48
IKBKB-228ENST00000523517 ATOX1O00244 68 aa12.07□□□□□ -0.48
IKBKB-228ENST00000523517 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms