RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 COX7B2Q8TF08 81 aa5.92□□□□□ -1.46
CSMD1-213ENST00000523488 ANKRD17O75179 2603 aaKnown RBP5.92□□□□□ -1.46
CSMD1-213ENST00000523488 NDUFC1O43677 76 aa5.92□□□□□ -1.46
CSMD1-213ENST00000523488 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
CSMD1-213ENST00000523488 CDSNQ15517 529 aa5.92□□□□□ -1.46
CSMD1-213ENST00000523488 TRBV7-4A0A0J9YYF1 115 aa5.91□□□□□ -1.46
CSMD1-213ENST00000523488 IGHV3-53P01767 116 aa5.91□□□□□ -1.46
CSMD1-213ENST00000523488 CCL18P55774 89 aa5.91□□□□□ -1.46
CSMD1-213ENST00000523488 Q6ZSN1 163 aa5.91□□□□□ -1.46
CSMD1-213ENST00000523488 C11orf72Q8NBR9 251 aa5.9□□□□□ -1.46
CSMD1-213ENST00000523488 PRM2P04554 102 aa5.9□□□□□ -1.46
CSMD1-213ENST00000523488 IGHV4-31P0DP07 118 aa5.9□□□□□ -1.46
CSMD1-213ENST00000523488 K7EQG2 157 aa5.9□□□□□ -1.47
CSMD1-213ENST00000523488 LRBAP50851 2863 aa5.9□□□□□ -1.47
CSMD1-213ENST00000523488 LOC100131303A0A0U1RQF7 123 aa5.89□□□□□ -1.47
CSMD1-213ENST00000523488 MIFP14174 115 aa5.89□□□□□ -1.47
CSMD1-213ENST00000523488 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
CSMD1-213ENST00000523488 CXCL6P80162 114 aa5.89□□□□□ -1.47
CSMD1-213ENST00000523488 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
CSMD1-213ENST00000523488 TRAV10A0A0B4J240 114 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 H3BUX3 64 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 ADORA2A-AS1P86434 159 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 Q6ZTI0 123 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 CFAP46Q8IYW2 2715 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 A0A096LNT2 108 aa5.88□□□□□ -1.47
CSMD1-213ENST00000523488 DEFB131AP59861 70 aa5.87□□□□□ -1.47
CSMD1-213ENST00000523488 Q96MF0 132 aa5.87□□□□□ -1.47
CSMD1-213ENST00000523488 RELNP78509 3460 aa5.87□□□□□ -1.47
CSMD1-213ENST00000523488 CSMD1Q96PZ7 3565 aa5.87□□□□□ -1.47
CSMD1-213ENST00000523488 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 Q6ZRU5 148 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 C6orf223Q8N319 242 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 Q8N3U1 123 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 Q8N814 137 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 CELA1Q9UNI1 258 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 DCHS2Q6V1P9 2916 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
CSMD1-213ENST00000523488 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 SCXQ7RTU7 201 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
CSMD1-213ENST00000523488 CR1P17927 2039 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 TRBV6-4A0A1B0GX49 114 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 Q6ZQT0 140 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 PRR15Q8IV56 129 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 C19orf84I3L1E1 186 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 H3BQ85 93 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSMD1-213ENST00000523488 DYNLRB2Q8TF09 96 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 FLNCQ14315 2725 aa5.85□□□□□ -1.47
CSMD1-213ENST00000523488 K7EQD1 137 aa5.84□□□□□ -1.47
CSMD1-213ENST00000523488 PLA2G2AP14555 144 aa5.84□□□□□ -1.47
CSMD1-213ENST00000523488 Q6ZVQ6 151 aa5.84□□□□□ -1.47
CSMD1-213ENST00000523488 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
CSMD1-213ENST00000523488 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.48
CSMD1-213ENST00000523488 A6NDX4 124 aa5.84□□□□□ -1.48
CSMD1-213ENST00000523488 NREPQ16612 68 aa5.84□□□□□ -1.48
CSMD1-213ENST00000523488 TMEM254Q8TBM7 123 aa5.84□□□□□ -1.48
CSMD1-213ENST00000523488 DAD1P61803 113 aa5.83□□□□□ -1.48
CSMD1-213ENST00000523488 ESRGQ1W209 222 aa5.83□□□□□ -1.48
CSMD1-213ENST00000523488 USP24Q9UPU5 2620 aa5.83□□□□□ -1.48
CSMD1-213ENST00000523488 IGHV4-61A0A0C4DH41 118 aa5.83□□□□□ -1.48
CSMD1-213ENST00000523488 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
CSMD1-213ENST00000523488 IGHV4-30-2A0A087WSY4 118 aa5.82□□□□□ -1.48
CSMD1-213ENST00000523488 ASH1LQ9NR48 2969 aaKnown RBP5.82□□□□□ -1.48
CSMD1-213ENST00000523488 Q6ZTC4 211 aa5.82□□□□□ -1.48
CSMD1-213ENST00000523488 MUC7Q8TAX7 377 aa5.82□□□□□ -1.48
CSMD1-213ENST00000523488 A0A087WZ39 114 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 INSP01308 110 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 PRR3P79522 188 aaKnown RBP5.81□□□□□ -1.48
CSMD1-213ENST00000523488 C6orf99Q4VX62 202 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 RETNQ9HD89 108 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 HRNRQ86YZ3 2850 aaPredicted RBP5.81□□□□□ -1.48
CSMD1-213ENST00000523488 UBE2E2Q96LR5 201 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 PDE6GP18545 87 aa5.81□□□□□ -1.48
CSMD1-213ENST00000523488 BPY2O14599 106 aa5.8□□□□□ -1.48
CSMD1-213ENST00000523488 LRCOL1A6NCL2 159 aa5.8□□□□□ -1.48
CSMD1-213ENST00000523488 Q1T7F1 81 aa5.8□□□□□ -1.48
CSMD1-213ENST00000523488 DEFB114Q30KQ6 69 aa5.8□□□□□ -1.48
CSMD1-213ENST00000523488 IGHV3OR16-9A0A0B4J2B5 98 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 PLAC8L1A1L4L8 177 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 PRYO14603 147 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 FAM229BQ4G0N7 80 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 TRGV2A0A075B6R0 118 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 A0A1W2PPR1 153 aa5.79□□□□□ -1.48
CSMD1-213ENST00000523488 TEP1Q99973 2627 aaKnown RBP5.78□□□□□ -1.48
CSMD1-213ENST00000523488 ZNF843Q8N446 348 aa5.78□□□□□ -1.48
CSMD1-213ENST00000523488 HELZ2Q9BYK8 2649 aaKnown RBP5.78□□□□□ -1.48
CSMD1-213ENST00000523488 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
CSMD1-213ENST00000523488 MSMBP08118 114 aa5.78□□□□□ -1.48
CSMD1-213ENST00000523488 ZCCHC13Q8WW36 166 aaKnown RBP5.78□□□□□ -1.48
CSMD1-213ENST00000523488 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
CSMD1-213ENST00000523488 COX17Q14061 63 aa5.77□□□□□ -1.49
CSMD1-213ENST00000523488 DEFB136Q30KP8 78 aa5.77□□□□□ -1.49
CSMD1-213ENST00000523488 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
CSMD1-213ENST00000523488 DNAH1Q9P2D7 4330 aa5.77□□□□□ -1.49
CSMD1-213ENST00000523488 B4DSR2 109 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms