RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 MPV17L2Q567V2 206 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 Q6ZUT4 128 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 LINC00269Q8N2A0 174 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 C20orf203Q8NBC4 194 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 C20orf78Q9BR46 151 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 TP73-AS1Q9UF72 201 aa2.31□□□□□ -2.04
NPM1-210ENST00000523339 IGLV4-69A0A075B6H9 119 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 PPBPP02775 128 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 S100A8P05109 93 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 LINC00614P0C842 121 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 PMCHP20382 165 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 RAB5BP61020 215 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 RNASEKQ6P5S7 137 aaKnown RBP2.3□□□□□ -2.04
NPM1-210ENST00000523339 LINC00337Q8N6G1 96 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 BORCS7Q96B45 105 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 TOMM6Q96B49 74 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 MAP1LC3AQ9H492 121 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 ST20Q9HBF5 79 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 LAMTOR2Q9Y2Q5 125 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 UBE2D4Q9Y2X8 147 aa2.3□□□□□ -2.04
NPM1-210ENST00000523339 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
NPM1-210ENST00000523339 A0A087WZ39 114 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 A0A096LNI7 61 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 TRBV6-8A0A0A6YYG3 113 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 IGKV3OR2-268A0A0C4DH90 116 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 I3L3M4 83 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 VCYO14598 125 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 C3orf79P0CE67 100 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 CFC1BP0CG36 223 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 FCER1GP30273 86 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 REG3AQ06141 175 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 GAGE2BQ13066 116 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 GAGE6Q13070 117 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 PYY3Q5JQD4 70 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 C2orf66Q6UXQ4 117 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
NPM1-210ENST00000523339 AMELXQ99217 191 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 PMCHL2Q9BQD1 86 aa2.29□□□□□ -2.04
NPM1-210ENST00000523339 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 H0Y9J4 135 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 M0R2T5 61 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 UBE2L6O14933 153 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 HBDP02042 147 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 NPSP0C0P6 89 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 FGF6P10767 208 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 FABP4P15090 132 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 AMTP48728 403 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 TSPEAR-AS2P59090 65 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 RBX1P62877 108 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 FA2HQ7L5A8 372 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 MRPL52Q86TS9 123 aaKnown RBP2.28□□□□□ -2.04
NPM1-210ENST00000523339 BAGE3Q86Y29 109 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 RETNLBQ9BQ08 111 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 NXT2Q9NPJ8 142 aaKnown RBP2.28□□□□□ -2.04
NPM1-210ENST00000523339 CDC42SE2Q9NRR3 84 aa2.28□□□□□ -2.04
NPM1-210ENST00000523339 IGLV7-46A0A075B6I9 117 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 TRBV25-1A0A075B6N4 114 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 IGKV2D-26A0A0A0MRZ7 120 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 C11orf86A6NJI1 115 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 SYS1-DBNDD2H3BUS1 97 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
NPM1-210ENST00000523339 COTL1Q14019 142 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 TMEM97Q5BJF2 176 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 LINC00242Q5T6M2 205 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 LINC01545Q5VT33 79 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 SMIM15Q7Z3B0 74 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 ATOH7Q8N100 152 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 OR10D4PQ8NGN7 298 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 TMEM18Q96B42 140 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 CARD19Q96LW7 228 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 PACRGQ96M98 296 aaPredicted RBP2.27□□□□□ -2.05
NPM1-210ENST00000523339 TMEM243Q9BU79 118 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 TTTY13Q9BZ97 58 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 PRR34Q9NV39 138 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
NPM1-210ENST00000523339 PYGO1Q9Y3Y4 419 aa2.27□□□□□ -2.05
NPM1-210ENST00000523339 IGLV5-45A0A087WSX0 123 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 A0A1B0GUV1 79 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 HSBP1O75506 76 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 PPP1R17O96001 155 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 IGLC3P0DOY3 106 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 ZNF22P17026 224 aaPredicted RBP2.26□□□□□ -2.05
NPM1-210ENST00000523339 UBE2BP63146 152 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 RPL18AQ02543 176 aaKnown RBP2.26□□□□□ -2.05
NPM1-210ENST00000523339 ORMDL2Q53FV1 153 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 ERASQ7Z444 233 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 FAM19A3Q7Z5A8 133 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 TYMSOSQ8TAI1 123 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 TIMM17AQ99595 171 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms