RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 APLNQ9ULZ1 77 aa-0.65□□□□□ -2.51
PCM1-217ENST00000522998 TEX15Q9BXT5 2789 aa-0.66□□□□□ -2.51
PCM1-217ENST00000522998 ANKRD11Q6UB99 2663 aaPredicted RBP-0.66□□□□□ -2.51
PCM1-217ENST00000522998 DNAH3Q8TD57 4116 aa-0.66□□□□□ -2.51
PCM1-217ENST00000522998 TRBV7-4A0A0J9YYF1 115 aa-0.66□□□□□ -2.52
PCM1-217ENST00000522998 LINC00959A0A1B0GUT2 108 aa-0.66□□□□□ -2.52
PCM1-217ENST00000522998 C10orf113Q5VZT2 155 aa-0.66□□□□□ -2.52
PCM1-217ENST00000522998 MYOZ3Q8TDC0 251 aa-0.66□□□□□ -2.52
PCM1-217ENST00000522998 NXT2Q9NPJ8 142 aaKnown RBP-0.66□□□□□ -2.52
PCM1-217ENST00000522998 PAPPA2Q9BXP8 1791 aa-0.66□□□□□ -2.52
PCM1-217ENST00000522998 MAGI1Q96QZ7 1491 aaPredicted RBP-0.67□□□□□ -2.52
PCM1-217ENST00000522998 TET3O43151 1660 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 SCN7AQ01118 1682 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 OOSP1A8MZH6 123 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 CHKB-CPT1BH3BT56 60 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 SYS1-DBNDD2H3BUS1 97 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 IGLC1P0CG04 106 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 WHAMMP3Q1A5X7 153 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 C1orf54Q8WWF1 131 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 CRIPTQ9P021 101 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 A0A0C4DFX4 3053 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 A2ML1A8K2U0 1454 aa-0.67□□□□□ -2.52
PCM1-217ENST00000522998 DNAH9Q9NYC9 4486 aa-0.68□□□□□ -2.52
PCM1-217ENST00000522998 CUBNO60494 3623 aa-0.68□□□□□ -2.52
PCM1-217ENST00000522998 CPSF4LA6NMK7 179 aaKnown RBP-0.68□□□□□ -2.52
PCM1-217ENST00000522998 H1FX-AS1Q4G0G2 97 aa-0.68□□□□□ -2.52
PCM1-217ENST00000522998 MARF1Q9Y4F3 1742 aaKnown RBP-0.68□□□□□ -2.52
PCM1-217ENST00000522998 COL4A6Q14031 1691 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 GCN1Q92616 2671 aaKnown RBP-0.69□□□□□ -2.52
PCM1-217ENST00000522998 PKHD1L1Q86WI1 4243 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 ADAMTS12P58397 1594 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 RYR2Q92736 4967 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 AKAIN1P0CW23 69 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 LCN9Q8WX39 176 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 PP6455Q8WZ26 134 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 FAM167A-AS1Q96KT0 104 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 FAIMQ9NVQ4 179 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 UQCR10Q9UDW1 63 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 AKAP9Q99996 3911 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 SLIT1O75093 1534 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 LAMA3Q16787 3333 aa-0.69□□□□□ -2.52
PCM1-217ENST00000522998 KTN1Q86UP2 1357 aaKnown RBP-0.7□□□□□ -2.52
PCM1-217ENST00000522998 LYSTQ99698 3801 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 COL14A1Q05707 1796 aaKnown RBP-0.7□□□□□ -2.52
PCM1-217ENST00000522998 RNF213Q63HN8 5207 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 UBE2L5PA0A1B0GUS4 154 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 HMGN1P05114 100 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 COX8AP10176 69 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 UBE2L3P68036 154 aaKnown RBP-0.7□□□□□ -2.52
PCM1-217ENST00000522998 FAM223AQ8IWN6 122 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 FDCSPQ8NFU4 85 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 TSC22D3Q99576 134 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 DPH3P1Q9H4G8 78 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 EHBP1L1Q8N3D4 1523 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 SETBP1Q9Y6X0 1596 aa-0.7□□□□□ -2.52
PCM1-217ENST00000522998 PTPN23Q9H3S7 1636 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 NLRP1Q9C000 1473 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 XRN1Q8IZH2 1706 aaKnown RBP-0.71□□□□□ -2.52
PCM1-217ENST00000522998 MT1AP04731 61 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 UBA52P62987 128 aaKnown RBP-0.71□□□□□ -2.52
PCM1-217ENST00000522998 LELP1Q5T871 98 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 C9orf62Q8N4C0 152 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 LINC01600Q96MT4 127 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 ARL2-SNX15V9GYD0 113 aa-0.71□□□□□ -2.52
PCM1-217ENST00000522998 APOBP04114 4563 aaKnown RBP-0.71□□□□□ -2.52
PCM1-217ENST00000522998 CUL7Q14999 1698 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 TROQ12816 1431 aaPredicted RBP-0.72□□□□□ -2.52
PCM1-217ENST00000522998 NUP188Q5SRE5 1749 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 NBEAQ8NFP9 2946 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 F6UZH7 168 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 ATP5EP56381 51 aaPredicted RBP-0.72□□□□□ -2.52
PCM1-217ENST00000522998 USMG5Q96IX5 58 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 DIP2CQ9Y2E4 1556 aa-0.72□□□□□ -2.52
PCM1-217ENST00000522998 A0A0G2JMZ2 1700 aa-0.72□□□□□ -2.53
PCM1-217ENST00000522998 NALCNQ8IZF0 1738 aa-0.72□□□□□ -2.53
PCM1-217ENST00000522998 NKTRP30414 1462 aaKnown RBP-0.73□□□□□ -2.53
PCM1-217ENST00000522998 C1orf167Q5SNV9 1468 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 MRC2Q9UBG0 1479 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 DNAH11Q96DT5 4516 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.73□□□□□ -2.532e-6■■■■■ 40.5
PCM1-217ENST00000522998 TRIOO75962 3097 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 H3BNG1 76 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 UBE2D3P61077 147 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 UBE2D2P62837 147 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 C9orf153Q5TBE3 101 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 FAM107BQ9H098 131 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 PRO1933Q9H354 126 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 UTP20O75691 2785 aaKnown RBP-0.73□□□□□ -2.53
PCM1-217ENST00000522998 VPS13BQ7Z7G8 4022 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 DNAH2Q9P225 4427 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 MGAM2Q2M2H8 2515 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 PDCD11Q14690 1871 aaKnown RBP-0.73□□□□□ -2.53
PCM1-217ENST00000522998 ADGRL2O95490 1459 aa-0.73□□□□□ -2.53
PCM1-217ENST00000522998 H0YGG7 62 aa-0.74□□□□□ -2.53
PCM1-217ENST00000522998 GNG11P61952 73 aa-0.74□□□□□ -2.53
PCM1-217ENST00000522998 IER3IP1Q9Y5U9 82 aa-0.74□□□□□ -2.53
PCM1-217ENST00000522998 ANKRD36A6QL64 1941 aa-0.74□□□□□ -2.53
PCM1-217ENST00000522998 ROCK2O75116 1388 aaKnown RBP-0.74□□□□□ -2.53
PCM1-217ENST00000522998 PLEKHH2Q8IVE3 1493 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms