RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TRGC2P03986 189 aa11.13□□□□□ -0.63
CLK4-211ENST00000522556 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
CLK4-211ENST00000522556 SEC11AP67812 179 aa11.13□□□□□ -0.63
CLK4-211ENST00000522556 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
CLK4-211ENST00000522556 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
CLK4-211ENST00000522556 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
CLK4-211ENST00000522556 NDUFA6P56556 154 aa11.12□□□□□ -0.63
CLK4-211ENST00000522556 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
CLK4-211ENST00000522556 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
CLK4-211ENST00000522556 Q8IZM0 81 aa11.12□□□□□ -0.63
CLK4-211ENST00000522556 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
CLK4-211ENST00000522556 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
CLK4-211ENST00000522556 SCO1O75880 301 aa11.11□□□□□ -0.63
CLK4-211ENST00000522556 PRSS2P07478 247 aa11.11□□□□□ -0.63
CLK4-211ENST00000522556 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
CLK4-211ENST00000522556 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
CLK4-211ENST00000522556 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
CLK4-211ENST00000522556 LINC00310P59036 64 aa11.1□□□□□ -0.63
CLK4-211ENST00000522556 PHF5AQ7RTV0 110 aaKnown RBP11.1□□□□□ -0.63
CLK4-211ENST00000522556 FAT3Q8TDW7 4589 aa11.09□□□□□ -0.63
CLK4-211ENST00000522556 COLCA2A8K830 154 aa11.09□□□□□ -0.63
CLK4-211ENST00000522556 RAB5BP61020 215 aa11.09□□□□□ -0.63
CLK4-211ENST00000522556 CKS1BP61024 79 aa11.09□□□□□ -0.63
CLK4-211ENST00000522556 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
CLK4-211ENST00000522556 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
CLK4-211ENST00000522556 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
CLK4-211ENST00000522556 ZNF22P17026 224 aaPredicted RBP11.08□□□□□ -0.64
CLK4-211ENST00000522556 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
CLK4-211ENST00000522556 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
CLK4-211ENST00000522556 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
CLK4-211ENST00000522556 HERC1Q15751 4861 aa11.07□□□□□ -0.64
CLK4-211ENST00000522556 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
CLK4-211ENST00000522556 CHCHD1Q96BP2 118 aaKnown RBP11.07□□□□□ -0.64
CLK4-211ENST00000522556 C11orf86A6NJI1 115 aa11.06□□□□□ -0.64
CLK4-211ENST00000522556 NDUFC2-KCTD14E9PQ53 114 aa11.06□□□□□ -0.64
CLK4-211ENST00000522556 ATP5LO75964 103 aa11.06□□□□□ -0.64
CLK4-211ENST00000522556 BAGE3Q86Y29 109 aa11.06□□□□□ -0.64
CLK4-211ENST00000522556 F8VRH5 84 aa11.05□□□□□ -0.64
CLK4-211ENST00000522556 J3QL48 77 aa11.05□□□□□ -0.64
CLK4-211ENST00000522556 NUPR1O60356 82 aa11.04□□□□□ -0.64
CLK4-211ENST00000522556 SERF1AO75920 110 aa11.04□□□□□ -0.64
CLK4-211ENST00000522556 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
CLK4-211ENST00000522556 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
CLK4-211ENST00000522556 HSBP1O75506 76 aa11.02□□□□□ -0.65
CLK4-211ENST00000522556 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
CLK4-211ENST00000522556 IFI27L1Q96BM0 104 aa11.02□□□□□ -0.65
CLK4-211ENST00000522556 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
CLK4-211ENST00000522556 H3BRM9 83 aa11.01□□□□□ -0.65
CLK4-211ENST00000522556 CXCL5P42830 114 aa11.01□□□□□ -0.65
CLK4-211ENST00000522556 M0QXV9 152 aa11□□□□□ -0.65
CLK4-211ENST00000522556 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
CLK4-211ENST00000522556 OXTP01178 125 aa10.99□□□□□ -0.65
CLK4-211ENST00000522556 TMEM170BQ5T4T1 132 aa10.99□□□□□ -0.65
CLK4-211ENST00000522556 MT1HL1P0DM35 61 aa10.98□□□□□ -0.65
CLK4-211ENST00000522556 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
CLK4-211ENST00000522556 H0Y8G0 127 aa10.96□□□□□ -0.65
CLK4-211ENST00000522556 SRSF9Q13242 221 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLK4-211ENST00000522556 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
CLK4-211ENST00000522556 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
CLK4-211ENST00000522556 ODF1Q14990 250 aa10.94□□□□□ -0.66
CLK4-211ENST00000522556 TMEM223A0PJW6 202 aa10.93□□□□□ -0.66
CLK4-211ENST00000522556 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
CLK4-211ENST00000522556 FABP4P15090 132 aa10.93□□□□□ -0.66
CLK4-211ENST00000522556 C22orf24Q9Y442 160 aa10.93□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 PFN2P35080 140 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
CLK4-211ENST00000522556 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
CLK4-211ENST00000522556 UBE2BP63146 152 aa10.91□□□□□ -0.66
CLK4-211ENST00000522556 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
CLK4-211ENST00000522556 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
CLK4-211ENST00000522556 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
CLK4-211ENST00000522556 Q8NDZ9 215 aa10.88□□□□□ -0.67
CLK4-211ENST00000522556 TSPEAR-AS2P59090 65 aa10.87□□□□□ -0.67
CLK4-211ENST00000522556 GAGE10A6NGK3 116 aa10.86□□□□□ -0.67
CLK4-211ENST00000522556 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
CLK4-211ENST00000522556 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
CLK4-211ENST00000522556 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
CLK4-211ENST00000522556 A0A0U1RRA0 63 aa10.85□□□□□ -0.67
CLK4-211ENST00000522556 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
CLK4-211ENST00000522556 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
CLK4-211ENST00000522556 LINC00167Q96N53 147 aa10.84□□□□□ -0.67
CLK4-211ENST00000522556 TP73-AS1Q9UF72 201 aa10.84□□□□□ -0.67
CLK4-211ENST00000522556 PLA2G2DQ9UNK4 145 aa10.84□□□□□ -0.67
CLK4-211ENST00000522556 TNXBP22105 4242 aa10.84□□□□□ -0.67
CLK4-211ENST00000522556 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
CLK4-211ENST00000522556 VPREB1P12018 145 aa10.82□□□□□ -0.68
CLK4-211ENST00000522556 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
CLK4-211ENST00000522556 DPM2O94777 84 aa10.8□□□□□ -0.68
CLK4-211ENST00000522556 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
CLK4-211ENST00000522556 LINC00158P58513 81 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms