RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
CPNE3-205ENST00000522240 DLEU1O43261 78 aa8.64□□□□□ -1.03
CPNE3-205ENST00000522240 PSCAO43653 123 aa8.64□□□□□ -1.03
CPNE3-205ENST00000522240 PRSS2P07478 247 aa8.64□□□□□ -1.03
CPNE3-205ENST00000522240 CXCL5P42830 114 aa8.64□□□□□ -1.03
CPNE3-205ENST00000522240 NDUFA1O15239 70 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 KIAA0087Q14695 138 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 BOD1L2Q8IYS8 172 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 TOMM7Q9P0U1 55 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
CPNE3-205ENST00000522240 MYMXA0A1B0GTQ4 84 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 F8WDY8 70 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 TSTD3H0UI37 97 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
CPNE3-205ENST00000522240 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
CPNE3-205ENST00000522240 HERV-K104P63124 156 aa8.61□□□□□ -1.03
CPNE3-205ENST00000522240 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
CPNE3-205ENST00000522240 C14orf144Q96I85 54 aa8.61□□□□□ -1.03
CPNE3-205ENST00000522240 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
CPNE3-205ENST00000522240 UQCR10Q9UDW1 63 aa8.61□□□□□ -1.03
CPNE3-205ENST00000522240 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
CPNE3-205ENST00000522240 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
CPNE3-205ENST00000522240 CKS1BP61024 79 aa8.59□□□□□ -1.03
CPNE3-205ENST00000522240 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
CPNE3-205ENST00000522240 NTN5Q8WTR8 489 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-205ENST00000522240 PRO1933Q9H354 126 aa8.59□□□□□ -1.03
CPNE3-205ENST00000522240 KMT2AQ03164 3969 aa8.59□□□□□ -1.03
CPNE3-205ENST00000522240 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
CPNE3-205ENST00000522240 WFDC2Q14508 124 aa8.57□□□□□ -1.04
CPNE3-205ENST00000522240 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
CPNE3-205ENST00000522240 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
CPNE3-205ENST00000522240 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 LECT2O14960 151 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 TIMM17BO60830 172 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
CPNE3-205ENST00000522240 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
CPNE3-205ENST00000522240 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
CPNE3-205ENST00000522240 C2orf91Q6ZV80 131 aa8.55□□□□□ -1.04
CPNE3-205ENST00000522240 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
CPNE3-205ENST00000522240 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
CPNE3-205ENST00000522240 A0A087WTM6 91 aa8.54□□□□□ -1.04
CPNE3-205ENST00000522240 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
CPNE3-205ENST00000522240 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
CPNE3-205ENST00000522240 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
CPNE3-205ENST00000522240 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
CPNE3-205ENST00000522240 COX17Q14061 63 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 MEIG1Q5JSS6 88 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 Q6ZRU5 148 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
CPNE3-205ENST00000522240 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
CPNE3-205ENST00000522240 DNAH10Q8IVF4 4471 aa8.52□□□□□ -1.04
CPNE3-205ENST00000522240 RTL8CO15255 209 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
CPNE3-205ENST00000522240 C10orf25Q5T742 122 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 Q8N814 137 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 LITAFQ99732 161 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
CPNE3-205ENST00000522240 DDTP30046 118 aa8.51□□□□□ -1.05
CPNE3-205ENST00000522240 SPANXDQ9BXN6 97 aa8.51□□□□□ -1.05
CPNE3-205ENST00000522240 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
CPNE3-205ENST00000522240 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-205ENST00000522240 SLPIP03973 132 aa8.5□□□□□ -1.05
CPNE3-205ENST00000522240 Q6ZVH6 145 aa8.5□□□□□ -1.05
CPNE3-205ENST00000522240 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
CPNE3-205ENST00000522240 HSD52Q0P140 79 aa8.49□□□□□ -1.05
CPNE3-205ENST00000522240 TAL2Q16559 108 aa8.49□□□□□ -1.05
CPNE3-205ENST00000522240 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-205ENST00000522240 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
CPNE3-205ENST00000522240 GCSHP23434 173 aa8.48□□□□□ -1.05
CPNE3-205ENST00000522240 LINC00158P58513 81 aa8.48□□□□□ -1.05
CPNE3-205ENST00000522240 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
CPNE3-205ENST00000522240 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
CPNE3-205ENST00000522240 HERC2O95714 4834 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 DNAH17Q9UFH2 4485 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 IFITM1P13164 125 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 PFN2P35080 140 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
CPNE3-205ENST00000522240 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 LINC00336Q6ZUF6 198 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 HIST1H4GQ99525 98 aa8.47□□□□□ -1.05
CPNE3-205ENST00000522240 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CPNE3-205ENST00000522240 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
CPNE3-205ENST00000522240 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 242.3 ms