RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 M0R378 163 aa11.65□□□□□ -0.54
USP42-207ENST00000521713 A0A096LNJ9 63 aa11.65□□□□□ -0.54
USP42-207ENST00000521713 RETNQ9HD89 108 aa11.65□□□□□ -0.55
USP42-207ENST00000521713 Q8IZM0 81 aa11.64□□□□□ -0.55
USP42-207ENST00000521713 CDIP1Q9H305 208 aa11.64□□□□□ -0.55
USP42-207ENST00000521713 POLQO75417 2590 aa11.64□□□□□ -0.55
USP42-207ENST00000521713 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
USP42-207ENST00000521713 CASC2Q6XLA1 102 aa11.63□□□□□ -0.55
USP42-207ENST00000521713 LOC107984640A0A0U1RRK4 108 aa11.62□□□□□ -0.55
USP42-207ENST00000521713 C3orf84H3BNL1 204 aa11.61□□□□□ -0.55
USP42-207ENST00000521713 WFDC10BQ8IUB3 73 aa11.61□□□□□ -0.55
USP42-207ENST00000521713 LINC00474Q9P2X8 69 aa11.61□□□□□ -0.55
USP42-207ENST00000521713 Q6ZTC4 211 aa11.6□□□□□ -0.55
USP42-207ENST00000521713 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
USP42-207ENST00000521713 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 Q8N9L7 120 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 PRYO14603 147 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 ZNF73O43830 326 aaPredicted RBP11.59□□□□□ -0.55
USP42-207ENST00000521713 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 Q8N814 137 aa11.59□□□□□ -0.55
USP42-207ENST00000521713 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 ACANP16112 2415 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 FHL2Q14192 279 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 PRO0628Q9UI54 55 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 TRBV10-3A0A0K0K1G6 114 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 PMAIP1Q13794 54 aa11.58□□□□□ -0.56
USP42-207ENST00000521713 RPS28P62857 69 aaKnown RBP11.57□□□□□ -0.56
USP42-207ENST00000521713 AMELXQ99217 191 aa11.57□□□□□ -0.56
USP42-207ENST00000521713 A0A087WVE0 104 aa11.57□□□□□ -0.56
USP42-207ENST00000521713 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
USP42-207ENST00000521713 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
USP42-207ENST00000521713 CRYGAP11844 174 aa11.54□□□□□ -0.56
USP42-207ENST00000521713 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
USP42-207ENST00000521713 A0A096LNI7 61 aa11.54□□□□□ -0.56
USP42-207ENST00000521713 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
USP42-207ENST00000521713 LINC01546A6NGU7 62 aa11.54□□□□□ -0.56
USP42-207ENST00000521713 BCE1O60756 84 aa11.54□□□□□ -0.56
USP42-207ENST00000521713 WFDC13Q8IUB5 93 aa11.53□□□□□ -0.56
USP42-207ENST00000521713 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
USP42-207ENST00000521713 EGFEM1PQ0D2K5 195 aa11.52□□□□□ -0.56
USP42-207ENST00000521713 Q8N3U1 123 aa11.52□□□□□ -0.57
USP42-207ENST00000521713 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
USP42-207ENST00000521713 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
USP42-207ENST00000521713 PPDPFQ9H3Y8 114 aa11.51□□□□□ -0.57
USP42-207ENST00000521713 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
USP42-207ENST00000521713 SOSTDC1Q6X4U4 206 aa11.51□□□□□ -0.57
USP42-207ENST00000521713 ADAMTSL4-AS1Q5T5F5 129 aa11.51□□□□□ -0.57
USP42-207ENST00000521713 PRR4Q16378 134 aa11.5□□□□□ -0.57
USP42-207ENST00000521713 A0A087WYN8 130 aa11.49□□□□□ -0.57
USP42-207ENST00000521713 FHL3Q13643 280 aa11.49□□□□□ -0.57
USP42-207ENST00000521713 F8P00451 2351 aa11.49□□□□□ -0.57
USP42-207ENST00000521713 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
USP42-207ENST00000521713 A0A1B0GUV1 79 aa11.47□□□□□ -0.57
USP42-207ENST00000521713 PRO0461Q9UI25 63 aa11.47□□□□□ -0.57
USP42-207ENST00000521713 PTPRBP23467 1997 aa11.47□□□□□ -0.57
USP42-207ENST00000521713 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 CXCL6P80162 114 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 UNQ6190/PRO20217Q6UXQ8 127 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 F8WDY8 70 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 KRTAP24-1Q3LI83 254 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 LINC00846Q9NV44 126 aa11.46□□□□□ -0.58
USP42-207ENST00000521713 UTRNP46939 3433 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 TRBV7-6A0A0J9YX20 115 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 FSHBP01225 129 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 ESRGQ1W209 222 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
USP42-207ENST00000521713 LINC01561Q8N1V8 128 aa11.43□□□□□ -0.58
USP42-207ENST00000521713 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
USP42-207ENST00000521713 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
USP42-207ENST00000521713 LINC00208Q96KT6 92 aa11.43□□□□□ -0.58
USP42-207ENST00000521713 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
USP42-207ENST00000521713 Q6ZVQ6 151 aa11.42□□□□□ -0.58
USP42-207ENST00000521713 RPL37AP8A6NKH3 93 aa11.42□□□□□ -0.58
USP42-207ENST00000521713 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
USP42-207ENST00000521713 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
USP42-207ENST00000521713 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
USP42-207ENST00000521713 COX6A2Q02221 97 aa11.41□□□□□ -0.58
USP42-207ENST00000521713 Q6ZSN1 163 aa11.4□□□□□ -0.58
USP42-207ENST00000521713 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.59
USP42-207ENST00000521713 LINC01547P58512 204 aaPredicted RBP11.39□□□□□ -0.59
USP42-207ENST00000521713 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
USP42-207ENST00000521713 hDV103S1A0JD37 113 aa11.38□□□□□ -0.59
USP42-207ENST00000521713 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
USP42-207ENST00000521713 LINC00575Q6W349 94 aa11.36□□□□□ -0.59
USP42-207ENST00000521713 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
USP42-207ENST00000521713 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
USP42-207ENST00000521713 PSPHP1O15172 72 aa11.35□□□□□ -0.59
USP42-207ENST00000521713 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
USP42-207ENST00000521713 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
USP42-207ENST00000521713 HECTD1Q9ULT8 2610 aa11.34□□□□□ -0.59
USP42-207ENST00000521713 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
USP42-207ENST00000521713 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
USP42-207ENST00000521713 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
USP42-207ENST00000521713 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
USP42-207ENST00000521713 AGRNO00468 2067 aa11.32□□□□□ -0.6
USP42-207ENST00000521713 LINC00337Q8N6G1 96 aa11.32□□□□□ -0.6
USP42-207ENST00000521713 H3BNG1 76 aa11.31□□□□□ -0.6
USP42-207ENST00000521713 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms