RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 Q6ZUT4 128 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 SLC25A29Q8N8R3 303 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 WFDC9Q8NEX5 89 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 OR11H2Q8NH07 326 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 ORAOV1Q8WV07 137 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 ZMAT5Q9UDW3 170 aaKnown RBP2.35□□□□□ -2.03
CTHRC1-204ENST00000520880 TEP1Q99973 2627 aaKnown RBP2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TRGV4A0A0C4DH28 118 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 A0A0J9YXV3 536 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TRBV6-4A0A1B0GX49 114 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TMEM223A0PJW6 202 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 ZNF815PA8K554 130 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 K7EP13 123 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 FXYD2P54710 66 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 APOC4P55056 127 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 MRPS36P82909 103 aaKnown RBP2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TAL2Q16559 108 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 DEFB135Q30KP9 77 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 RNASE13Q5GAN3 156 aaKnown RBP2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 LINC00469Q8N7U9 141 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 PLEKHB2Q96CS7 222 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 GTSF1LQ9H1H1 148 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 VCX2Q9H322 139 aa2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 DAZ3Q9NR90 486 aaKnown RBP2.34□□□□□ -2.03
CTHRC1-204ENST00000520880 TINCRA0A1B0GVN0 87 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 A6NDN8 102 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 H3BRM9 83 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 J3QQQ9 107 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 LEPROTO15243 131 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 DEFB130BP0DP73 79 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 DEFB130AP0DP74 79 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 UBE2D1P51668 147 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 FAM222AQ5U5X8 452 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 FAM19A3Q7Z5A8 133 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 Q8NAQ8 132 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 CSDC2Q9Y534 153 aaKnown RBP2.33□□□□□ -2.04
CTHRC1-204ENST00000520880 CMYA5Q8N3K9 4069 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 ATRQ13535 2644 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 IGHV3-64A0A075B6Q5 118 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 TRBV6-8A0A0A6YYG3 113 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 TRAV8-3A0A0A6YYJ7 113 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 IGHV1-58A0A0C4DH39 117 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 A0A0J9YY99 117 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 A0A1B0GWB2 263 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 K7ERJ3 54 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 DEFB4AO15263 64 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 IGHV3-30-3P0DP02 117 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 MIFP14174 115 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 COX6A2Q02221 97 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 EGFEM1PQ0D2K5 195 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 HIST1H4GQ99525 98 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
CTHRC1-204ENST00000520880 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 A0A0J9YXY3 114 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 F5H768 121 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 H3BUT2 72 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 UBE2L6O14933 153 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 CCL25O15444 150 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 SPINK8P0C7L1 97 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 SMIM13P0DJ93 91 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 DAD1P61803 113 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 HERVK_113P63121 156 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 SMAGPQ0VAQ4 97 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 C12orf74Q32Q52 190 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 AMMECR1LQ6DCA0 310 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 ZFAND6Q6FIF0 208 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 C3orf56Q8N813 242 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 ATP6V0E2Q8NHE4 81 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 RAB37Q96AX2 223 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 NAA38Q9BRA0 125 aaKnown RBP2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 GEMIN7Q9H840 131 aaKnown RBP2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 RETNQ9HD89 108 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 PRO0255Q9UI72 69 aa2.31□□□□□ -2.04
CTHRC1-204ENST00000520880 DNAH3Q8TD57 4116 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 BAHCC1Q9P281 2608 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 A0A096LPF7 62 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 TRAV13-1A0A0B4J241 112 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 A0A1W2PPM0 123 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 IGLL5B9A064 214 aa2.3□□□□□ -2.04
CTHRC1-204ENST00000520880 G3V4G9 280 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms