RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 LCE6AA0A183 80 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 TIMM17BO60830 172 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 XCL1P47992 114 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 MIAQ16674 131 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 CLPSL2Q6UWE3 100 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 Q6ZVH6 145 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 CEND1Q8N111 149 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 COX7B2Q8TF08 81 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 CHCHD10Q8WYQ3 142 aaPredicted RBP5.76□□□□□ -1.49
VAPB-206ENST00000520497 TP73-AS1Q9UF72 201 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 KLK12Q9UKR0 248 aa5.76□□□□□ -1.49
VAPB-206ENST00000520497 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 CXCL5P42830 114 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 ENHOQ6UWT2 76 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 C10orf126Q8N4M7 172 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 TM2D2Q9BX73 214 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
VAPB-206ENST00000520497 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 K7EP13 123 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 RPL24P83731 157 aaKnown RBP5.74□□□□□ -1.49
VAPB-206ENST00000520497 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 C5orf38Q86SI9 138 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 UBE2WQ96B02 151 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 RMI2Q96E14 147 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 Q9H8V8 135 aa5.74□□□□□ -1.49
VAPB-206ENST00000520497 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 IFITM1P13164 125 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 CKS1BP61024 79 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 Q8IZM0 81 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 SPANXDQ9BXN6 97 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 SPANXCQ9NY87 97 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
VAPB-206ENST00000520497 IGLV10-54A0A075B6I4 117 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.72□□□□□ -1.49
VAPB-206ENST00000520497 GAGE12HA6NDE8 117 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 IBA57-AS1B1ANH7 110 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 C1orf43Q9BWL3 253 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
VAPB-206ENST00000520497 FOXI1Q12951 378 aa5.71□□□□□ -1.5
VAPB-206ENST00000520497 ZNF625Q96I27 306 aaPredicted RBP5.71□□□□□ -1.5
VAPB-206ENST00000520497 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
VAPB-206ENST00000520497 NHP2Q9NX24 153 aaKnown RBP5.71□□□□□ -1.5
VAPB-206ENST00000520497 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
VAPB-206ENST00000520497 DNAH6Q9C0G6 4158 aa5.7□□□□□ -1.5
VAPB-206ENST00000520497 FXYD2P54710 66 aa5.7□□□□□ -1.5
VAPB-206ENST00000520497 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
VAPB-206ENST00000520497 COX11Q9Y6N1 276 aa5.7□□□□□ -1.5
VAPB-206ENST00000520497 F8WDY8 70 aa5.69□□□□□ -1.5
VAPB-206ENST00000520497 SPAG11BQ08648 103 aa5.69□□□□□ -1.5
VAPB-206ENST00000520497 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
VAPB-206ENST00000520497 PPDPFQ9H3Y8 114 aa5.69□□□□□ -1.5
VAPB-206ENST00000520497 IGKV2D-24A0A075B6R9 120 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 A0A1B0GV90 55 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 LINC00158P58513 81 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 COX17Q14061 63 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 TTC32Q5I0X7 151 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 LINC00476Q8WZB0 136 aa5.68□□□□□ -1.5
VAPB-206ENST00000520497 A0A0B4J2C4 111 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 C9orf118A6NHY6 69 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 TAX1BP3O14907 124 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 LITAFQ99732 161 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 Q9HAA7 133 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 ERG28Q9UKR5 140 aa5.67□□□□□ -1.5
VAPB-206ENST00000520497 A4D1N5 150 aa5.66□□□□□ -1.5
VAPB-206ENST00000520497 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
VAPB-206ENST00000520497 FABP2P12104 132 aa5.66□□□□□ -1.5
VAPB-206ENST00000520497 VAMP3Q15836 100 aa5.66□□□□□ -1.5
VAPB-206ENST00000520497 Q6ZR54 194 aa5.66□□□□□ -1.5
VAPB-206ENST00000520497 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
VAPB-206ENST00000520497 GTF2H5Q6ZYL4 71 aa5.65□□□□□ -1.5
VAPB-206ENST00000520497 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
VAPB-206ENST00000520497 PRO1854Q9UHT4 67 aa5.65□□□□□ -1.5
VAPB-206ENST00000520497 TRBV30A0A0K0K1B3 111 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 H3BUT2 72 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 K7ERJ3 54 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 LY6G6CO95867 125 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 PFN2P35080 140 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 NPC2P61916 151 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 Q1RN00 199 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 ADAMTSL4-AS1Q5T5F5 129 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 MIR7-3HGQ8N6C7 128 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 C2orf48Q96LS8 159 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
VAPB-206ENST00000520497 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
VAPB-206ENST00000520497 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms