RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 APOC3P02656 99 aa3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 ORMDL2Q53FV1 153 aa3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 SVBPQ8N300 66 aa3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 LINC00469Q8N7U9 141 aa3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 ALKBH7Q9BT30 221 aaPredicted RBP3.66□□□□□ -1.82
IGKV3D-25-201ENST00000519599 RHEBQ15382 184 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 Q6ZN92 141 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 Q8NDZ9 215 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 C2orf88Q9BSF0 95 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 CTDSP1Q9GZU7 261 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 VCX2Q9H322 139 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 XAGE1AQ9HD64 81 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 NXT2Q9NPJ8 142 aaKnown RBP3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 MUC2Q02817 5179 aa3.65□□□□□ -1.83
IGKV3D-25-201ENST00000519599 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 A0A087X002 238 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SNAPINO95295 136 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 HERVK_113P63121 156 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 ERASQ7Z444 233 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 GNB1LQ9BYB4 327 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 RPS10P5Q9NQ39 176 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 TOMM7Q9P0U1 55 aa3.64□□□□□ -1.83
IGKV3D-25-201ENST00000519599 IGLV5-37A0A075B6J1 123 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 F8VRH5 84 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 ZNF861PO60384 105 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 S100PP25815 95 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 CST9LQ9H4G1 147 aa3.63□□□□□ -1.83
IGKV3D-25-201ENST00000519599 IGLV1-50A0A075B6I6 118 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 IGLV5-39A0A0G2JS06 123 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SCO1O75880 301 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 IGLC3P0DOY3 106 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PDZD11Q5EBL8 140 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 C18orf32Q8TCD1 76 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 YPEL4Q96NS1 127 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SCGB3A1Q96QR1 104 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 TP73-AS1Q9UF72 201 aa3.62□□□□□ -1.83
IGKV3D-25-201ENST00000519599 NUPR1O60356 82 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 CXCL5P42830 114 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 CKS1BP61024 79 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 UBE2BP63146 152 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PMVKQ15126 192 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 KRTAP13-2Q52LG2 175 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 C6orf226Q5I0X4 101 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 MRPL55Q7Z7F7 128 aaKnown RBP3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 MRPL18Q9H0U6 180 aaKnown RBP3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
IGKV3D-25-201ENST00000519599 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 BCE1O60756 84 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PRSS2P07478 247 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 VPREB1P12018 145 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SEC11AP67812 179 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PAPPA-AS1Q5QFB9 102 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 SMCO4Q9NRQ5 59 aa3.6□□□□□ -1.83
IGKV3D-25-201ENST00000519599 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
IGKV3D-25-201ENST00000519599 ATP6V1G1O75348 118 aa3.59□□□□□ -1.83
IGKV3D-25-201ENST00000519599 PMCHL1Q16048 86 aa3.59□□□□□ -1.83
IGKV3D-25-201ENST00000519599 ANAPC11Q9NYG5 84 aa3.59□□□□□ -1.83
IGKV3D-25-201ENST00000519599 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 GAGE10A6NGK3 116 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 G0S2P27469 103 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 RAB5BP61020 215 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 FABP9Q0Z7S8 132 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 COX19Q49B96 90 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 LBHQ53QV2 105 aaPredicted RBP3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
IGKV3D-25-201ENST00000519599 LINC01549A6NIU2 74 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 LINC00614P0C842 121 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 S100A1P23297 94 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 RPL13AP40429 203 aaKnown RBP3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 LINC00310P59036 64 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 FA2HQ7L5A8 372 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 ERG28Q9UKR5 140 aa3.57□□□□□ -1.84
IGKV3D-25-201ENST00000519599 IGKV2-28A0A075B6P5 120 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 TMEM238C9JI98 176 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 M0R378 163 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 IGKV2D-28P01615 120 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 HBDP02042 147 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 PRLHP81277 87 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
IGKV3D-25-201ENST00000519599 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 TSPAN13O95857 204 aa3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 PFN2P35080 140 aa3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 TMEM126AQ9H061 195 aa3.55□□□□□ -1.84
IGKV3D-25-201ENST00000519599 COLCA2A8K830 154 aa3.54□□□□□ -1.84
IGKV3D-25-201ENST00000519599 H3BRM9 83 aa3.54□□□□□ -1.84
IGKV3D-25-201ENST00000519599 ATP5LO75964 103 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms