RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 TMEM238C9JI98 176 aa9.91□□□□□ -0.82
PABPC1-210ENST00000519363 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
PABPC1-210ENST00000519363 LITAFQ99732 161 aa9.9□□□□□ -0.82
PABPC1-210ENST00000519363 KMT2AQ03164 3969 aa9.9□□□□□ -0.83
PABPC1-210ENST00000519363 DNAH2Q9P225 4427 aa9.89□□□□□ -0.83
PABPC1-210ENST00000519363 F8WDY8 70 aa9.89□□□□□ -0.83
PABPC1-210ENST00000519363 CKS1BP61024 79 aa9.89□□□□□ -0.83
PABPC1-210ENST00000519363 C2orf48Q96LS8 159 aa9.89□□□□□ -0.83
PABPC1-210ENST00000519363 M0R143 59 aa9.88□□□□□ -0.83
PABPC1-210ENST00000519363 Q6ZR54 194 aa9.88□□□□□ -0.83
PABPC1-210ENST00000519363 Q6ZVH6 145 aa9.88□□□□□ -0.83
PABPC1-210ENST00000519363 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-210ENST00000519363 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
PABPC1-210ENST00000519363 SPANXCQ9NY87 97 aa9.88□□□□□ -0.83
PABPC1-210ENST00000519363 CIRBPQ14011 172 aaKnown RBP9.87□□□□□ -0.83
PABPC1-210ENST00000519363 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
PABPC1-210ENST00000519363 SACSQ9NZJ4 4579 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 ZNF561-AS1K7EIQ3 104 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 BVES-AS1Q5T3Y7 98 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
PABPC1-210ENST00000519363 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
PABPC1-210ENST00000519363 Q6ZRN7 208 aaPredicted RBP9.85□□□□□ -0.83
PABPC1-210ENST00000519363 CEND1Q8N111 149 aa9.85□□□□□ -0.83
PABPC1-210ENST00000519363 LY6G6CO95867 125 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
PABPC1-210ENST00000519363 HIGD2BQ4VC39 106 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 C6orf223Q8N319 242 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
PABPC1-210ENST00000519363 TRBV30A0A0K0K1B3 111 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 EREGO14944 169 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 PSCAO43653 123 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 IFITM1P13164 125 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 COX17Q14061 63 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
PABPC1-210ENST00000519363 GCSHP23434 173 aa9.82□□□□□ -0.84
PABPC1-210ENST00000519363 C10orf25Q5T742 122 aa9.82□□□□□ -0.84
PABPC1-210ENST00000519363 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
PABPC1-210ENST00000519363 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
PABPC1-210ENST00000519363 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
PABPC1-210ENST00000519363 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
PABPC1-210ENST00000519363 COPS9Q8WXC6 57 aa9.81□□□□□ -0.84
PABPC1-210ENST00000519363 M0R2N4 97 aa9.8□□□□□ -0.84
PABPC1-210ENST00000519363 FXYD2P54710 66 aa9.8□□□□□ -0.84
PABPC1-210ENST00000519363 C6orf48Q9UBA6 75 aa9.8□□□□□ -0.84
PABPC1-210ENST00000519363 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 A6NJY4 79 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 LINC00158P58513 81 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 BATFQ16520 125 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 Q6ZRU5 148 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 FRAS1Q86XX4 4008 aa9.79□□□□□ -0.84
PABPC1-210ENST00000519363 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 A6NDN8 102 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 PFN2P35080 140 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
PABPC1-210ENST00000519363 WFDC2Q14508 124 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
PABPC1-210ENST00000519363 MUSTN1Q8IVN3 82 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 DAND5Q8N907 189 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
PABPC1-210ENST00000519363 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
PABPC1-210ENST00000519363 LECT2O14960 151 aa9.77□□□□□ -0.85
PABPC1-210ENST00000519363 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
PABPC1-210ENST00000519363 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
PABPC1-210ENST00000519363 CNBPP62633 177 aaKnown RBP9.76□□□□□ -0.85
PABPC1-210ENST00000519363 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-210ENST00000519363 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
PABPC1-210ENST00000519363 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
PABPC1-210ENST00000519363 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
PABPC1-210ENST00000519363 COL5A1-AS1Q5SY13 56 aa9.75□□□□□ -0.85
PABPC1-210ENST00000519363 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-210ENST00000519363 A4D1N5 150 aa9.74□□□□□ -0.85
PABPC1-210ENST00000519363 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-210ENST00000519363 SLPIP03973 132 aa9.74□□□□□ -0.85
PABPC1-210ENST00000519363 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
PABPC1-210ENST00000519363 NDUFC2-KCTD14E9PQ53 114 aa9.73□□□□□ -0.85
PABPC1-210ENST00000519363 NPC2P61916 151 aa9.73□□□□□ -0.85
PABPC1-210ENST00000519363 NHP2Q9NX24 153 aaKnown RBP9.73□□□□□ -0.85
PABPC1-210ENST00000519363 HECTD4Q9Y4D8 3996 aa9.73□□□□□ -0.85
PABPC1-210ENST00000519363 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
PABPC1-210ENST00000519363 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
PABPC1-210ENST00000519363 RYR2Q92736 4967 aa9.72□□□□□ -0.85
PABPC1-210ENST00000519363 LCE6AA0A183 80 aa9.71□□□□□ -0.86
PABPC1-210ENST00000519363 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
PABPC1-210ENST00000519363 A0A087WTM6 91 aa9.7□□□□□ -0.86
PABPC1-210ENST00000519363 Q8N814 137 aa9.7□□□□□ -0.86
PABPC1-210ENST00000519363 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
PABPC1-210ENST00000519363 CFC1P0CG37 223 aa9.69□□□□□ -0.86
PABPC1-210ENST00000519363 FAT2Q9NYQ8 4349 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms