RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
CTNNA1-215ENST00000519309 CDIP1Q9H305 208 aa4.91□□□□□ -1.62
CTNNA1-215ENST00000519309 MAP1LC3AQ9H492 121 aa4.91□□□□□ -1.62
CTNNA1-215ENST00000519309 PYGO1Q9Y3Y4 419 aa4.91□□□□□ -1.62
CTNNA1-215ENST00000519309 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
CTNNA1-215ENST00000519309 ZNF861PO60384 105 aa4.9□□□□□ -1.63
CTNNA1-215ENST00000519309 C2orf82Q6UX34 121 aa4.9□□□□□ -1.63
CTNNA1-215ENST00000519309 LAMTOR2Q9Y2Q5 125 aa4.9□□□□□ -1.63
CTNNA1-215ENST00000519309 UBE2BP63146 152 aa4.89□□□□□ -1.63
CTNNA1-215ENST00000519309 AMELXQ99217 191 aa4.89□□□□□ -1.63
CTNNA1-215ENST00000519309 CTDSP1Q9GZU7 261 aa4.89□□□□□ -1.63
CTNNA1-215ENST00000519309 CYSLTR1Q9Y271 337 aa4.89□□□□□ -1.63
CTNNA1-215ENST00000519309 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
CTNNA1-215ENST00000519309 TGIF2-C20orf24A0A0A6YYL0 155 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 NDUFA1O15239 70 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 LINC01547P58512 204 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 CTAG1AP78358 180 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 UQCC3Q6UW78 93 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 TEX43Q6ZNM6 134 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
CTNNA1-215ENST00000519309 NUPR1O60356 82 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 CRYGAP11844 174 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 FAM19A3Q7Z5A8 133 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 COMMD7Q86VX2 200 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 SEC11CQ9BY50 192 aa4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-215ENST00000519309 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 GAGE2EQ4V326 116 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 C10orf91Q5T1B1 145 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 TOMM6Q96B49 74 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 ALKBH7Q9BT30 221 aaPredicted RBP4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 VCX2Q9H322 139 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 GAGE2DQ9UEU5 116 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
CTNNA1-215ENST00000519309 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
CTNNA1-215ENST00000519309 Q6ZN92 141 aa4.85□□□□□ -1.63
CTNNA1-215ENST00000519309 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
CTNNA1-215ENST00000519309 TOMM7Q9P0U1 55 aa4.85□□□□□ -1.63
CTNNA1-215ENST00000519309 TRAV9-1A0A075B6T8 112 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 A0A096LNJ9 63 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 NDUFC2-KCTD14E9PQ53 114 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 K7EMI3 77 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 NPSP0C0P6 89 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 ASB16-AS1Q495Z4 193 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 LINC01561Q8N1V8 128 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 LINC00469Q8N7U9 141 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 URB1-AS1Q96HZ7 61 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 TIMM17AQ99595 171 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 GNB1LQ9BYB4 327 aa4.84□□□□□ -1.63
CTNNA1-215ENST00000519309 SMIM1B2RUZ4 78 aa4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 RPL28P46779 137 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 FAM229BQ4G0N7 80 aa4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 ERASQ7Z444 233 aa4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 SCGB3A1Q96QR1 104 aa4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 XAGE1AQ9HD64 81 aa4.83□□□□□ -1.64
CTNNA1-215ENST00000519309 S100PP25815 95 aa4.82□□□□□ -1.64
CTNNA1-215ENST00000519309 Q8IZM0 81 aa4.82□□□□□ -1.64
CTNNA1-215ENST00000519309 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
CTNNA1-215ENST00000519309 PPDPFQ9H3Y8 114 aa4.82□□□□□ -1.64
CTNNA1-215ENST00000519309 RPS10P5Q9NQ39 176 aa4.82□□□□□ -1.64
CTNNA1-215ENST00000519309 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 BCE1O60756 84 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 PRSS2P07478 247 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 SPINK8P0C7L1 97 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 CKS1BP61024 79 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 HERVK_113P63121 156 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 FABP9Q0Z7S8 132 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 RHEBQ15382 184 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 PMCHL1Q16048 86 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 C6orf226Q5I0X4 101 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 PACRGQ96M98 296 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 GEMIN7Q9H840 131 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
CTNNA1-215ENST00000519309 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
CTNNA1-215ENST00000519309 F8VRH5 84 aa4.8□□□□□ -1.64
CTNNA1-215ENST00000519309 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-215ENST00000519309 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
CTNNA1-215ENST00000519309 C18orf32Q8TCD1 76 aa4.8□□□□□ -1.64
CTNNA1-215ENST00000519309 SEC11AP67812 179 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 LBHQ53QV2 105 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 PAPPA-AS1Q5QFB9 102 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 FA2HQ7L5A8 372 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 COX7B2Q8TF08 81 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 YPEL4Q96NS1 127 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 C22orf24Q9Y442 160 aa4.79□□□□□ -1.64
CTNNA1-215ENST00000519309 APOC3P02656 99 aa4.78□□□□□ -1.64
CTNNA1-215ENST00000519309 G0S2P27469 103 aa4.78□□□□□ -1.64
CTNNA1-215ENST00000519309 PMVKQ15126 192 aa4.78□□□□□ -1.64
CTNNA1-215ENST00000519309 PDZD11Q5EBL8 140 aa4.78□□□□□ -1.64
CTNNA1-215ENST00000519309 ANAPC11Q9NYG5 84 aa4.78□□□□□ -1.64
CTNNA1-215ENST00000519309 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
CTNNA1-215ENST00000519309 SCO1O75880 301 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms