RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ANKRD39Q53RE8 183 aa12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 C14orf144Q96I85 54 aa12.14□□□□□ -0.47
CTNNA1-213ENST00000519113 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
CTNNA1-213ENST00000519113 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-213ENST00000519113 C11orf86A6NJI1 115 aa12.12□□□□□ -0.47
CTNNA1-213ENST00000519113 PANO1I0J062 215 aa12.12□□□□□ -0.47
CTNNA1-213ENST00000519113 TNXBP22105 4242 aa12.11□□□□□ -0.47
CTNNA1-213ENST00000519113 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
CTNNA1-213ENST00000519113 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
CTNNA1-213ENST00000519113 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
CTNNA1-213ENST00000519113 HERVK_113P61574 105 aa12.1□□□□□ -0.47
CTNNA1-213ENST00000519113 SLC25A34Q6PIV7 304 aa12.1□□□□□ -0.47
CTNNA1-213ENST00000519113 COX8AP10176 69 aa12.09□□□□□ -0.47
CTNNA1-213ENST00000519113 NMUP48645 174 aa12.09□□□□□ -0.47
CTNNA1-213ENST00000519113 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-213ENST00000519113 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
CTNNA1-213ENST00000519113 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
CTNNA1-213ENST00000519113 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
CTNNA1-213ENST00000519113 UBE2D1P51668 147 aa12.08□□□□□ -0.48
CTNNA1-213ENST00000519113 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
CTNNA1-213ENST00000519113 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-213ENST00000519113 SEC11AP67812 179 aa12.07□□□□□ -0.48
CTNNA1-213ENST00000519113 GEMIN7Q9H840 131 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-213ENST00000519113 A0A1B0GUV1 79 aa12.06□□□□□ -0.48
CTNNA1-213ENST00000519113 E9PLD3 99 aa12.05□□□□□ -0.48
CTNNA1-213ENST00000519113 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-213ENST00000519113 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
CTNNA1-213ENST00000519113 LINC00269Q8N2A0 174 aa12.05□□□□□ -0.48
CTNNA1-213ENST00000519113 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 IGKV2D-26A0A0A0MRZ7 120 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 DLEU1O43261 78 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 RBX1P62877 108 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
CTNNA1-213ENST00000519113 A0A087WYN8 130 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 TMEM223A0PJW6 202 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 HERVK_113P63121 156 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 BOD1L2Q8IYS8 172 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
CTNNA1-213ENST00000519113 H3BRM9 83 aa12.02□□□□□ -0.49
CTNNA1-213ENST00000519113 LINC00469Q8N7U9 141 aa12.02□□□□□ -0.49
CTNNA1-213ENST00000519113 LINC01600Q96MT4 127 aa12.02□□□□□ -0.49
CTNNA1-213ENST00000519113 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
CTNNA1-213ENST00000519113 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
CTNNA1-213ENST00000519113 LEPROTO15243 131 aa12□□□□□ -0.49
CTNNA1-213ENST00000519113 CTAG1AP78358 180 aa12□□□□□ -0.49
CTNNA1-213ENST00000519113 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
CTNNA1-213ENST00000519113 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 REG3AQ06141 175 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 PLAC8Q9NZF1 115 aa11.99□□□□□ -0.49
CTNNA1-213ENST00000519113 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
CTNNA1-213ENST00000519113 LGALS3P17931 250 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-213ENST00000519113 COX6A2Q02221 97 aa11.98□□□□□ -0.49
CTNNA1-213ENST00000519113 TP73-AS1Q9UF72 201 aa11.98□□□□□ -0.49
CTNNA1-213ENST00000519113 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
CTNNA1-213ENST00000519113 SS18Q15532 418 aa11.97□□□□□ -0.49
CTNNA1-213ENST00000519113 TTTY13Q9BZ97 58 aa11.97□□□□□ -0.49
CTNNA1-213ENST00000519113 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
CTNNA1-213ENST00000519113 LINC00959A0A1B0GUT2 108 aa11.96□□□□□ -0.49
CTNNA1-213ENST00000519113 J3QQQ9 107 aa11.96□□□□□ -0.49
CTNNA1-213ENST00000519113 CCL25O15444 150 aa11.96□□□□□ -0.49
CTNNA1-213ENST00000519113 SLPIP03973 132 aa11.96□□□□□ -0.49
CTNNA1-213ENST00000519113 IGHV1-58A0A0C4DH39 117 aa11.95□□□□□ -0.5
CTNNA1-213ENST00000519113 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
CTNNA1-213ENST00000519113 SPINK8P0C7L1 97 aa11.95□□□□□ -0.5
CTNNA1-213ENST00000519113 M0R143 59 aa11.94□□□□□ -0.5
CTNNA1-213ENST00000519113 C2orf91Q6ZV80 131 aa11.94□□□□□ -0.5
CTNNA1-213ENST00000519113 HIGD1BQ9P298 99 aa11.93□□□□□ -0.5
CTNNA1-213ENST00000519113 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
CTNNA1-213ENST00000519113 PRR3P79522 188 aaKnown RBP11.91□□□□□ -0.5
CTNNA1-213ENST00000519113 CFAP161Q6P656 301 aa11.91□□□□□ -0.5
CTNNA1-213ENST00000519113 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
CTNNA1-213ENST00000519113 REG3GQ6UW15 175 aa11.9□□□□□ -0.5
CTNNA1-213ENST00000519113 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
CTNNA1-213ENST00000519113 XCL1P47992 114 aa11.89□□□□□ -0.51
CTNNA1-213ENST00000519113 BATFQ16520 125 aa11.89□□□□□ -0.51
CTNNA1-213ENST00000519113 SNHG12Q9BXW3 62 aa11.89□□□□□ -0.51
CTNNA1-213ENST00000519113 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 SMIM1B2RUZ4 78 aa11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 HINT1P49773 126 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 HSD52Q0P140 79 aa11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
CTNNA1-213ENST00000519113 A0A087WZ39 114 aa11.87□□□□□ -0.51
CTNNA1-213ENST00000519113 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
CTNNA1-213ENST00000519113 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-213ENST00000519113 NDUFA12Q9UI09 145 aa11.87□□□□□ -0.51
CTNNA1-213ENST00000519113 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
CTNNA1-213ENST00000519113 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
CTNNA1-213ENST00000519113 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
CTNNA1-213ENST00000519113 TAL2Q16559 108 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms